Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 25 curated entries in PaperBLAST's database that match '1.4.4.2' as complete word(s).
These curated entries have 18 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
| AO356_18170: glycine dehydrogenase is similar to: | PaperBLAST |
Pf6N2E2_5558: Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Pseudomonas fluorescens | 98% id, 100% cov |
AO353_03500: Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Pseudomonas fluorescens | 95% id, 100% cov |
PfGW456L13_1868: Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Pseudomonas fluorescens | 94% id, 100% cov |
| AO356_13040: glycine cleavage system protein H is similar to: | PaperBLAST |
P25855: glycine cleavage system (subunit 3/5) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Arabidopsis thaliana | 50% id, 73% cov |
P23434: glycine cleavage system (subunit 3/4) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Homo sapiens | 48% id, 72% cov |
| AO356_18175: glycine cleavage system protein H is similar to: | PaperBLAST |
P23434: glycine cleavage system (subunit 3/4) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Homo sapiens | 44% id, 73% cov |
P25855: glycine cleavage system (subunit 3/5) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Arabidopsis thaliana | 40% id, 77% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4096961-4097410 (frame -3) on CP012831 is similar to: | PaperBLAST |
P25855: glycine cleavage system (subunit 3/5) (EC 1.4.1.27); glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) from Arabidopsis thaliana | 39% id, 84% cov |
Lawrence Berkeley National Laboratory