Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 29 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_17740: 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
is similar to:

MetE / b3829: cobalamin-independent homocysteine transmethylase (EC from Escherichia coli
metE: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; EC from Escherichia coli
metE / P25665: cobalamin-independent homocysteine transmethylase (EC from Escherichia coli
P25665: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase (EC from Escherichia coli

62% id,
99% cov

METE_KALTU / C1KEU0: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Pollen allergen Sal k 3; SkMetE; Vitamin-B12-independent methionine synthase; Allergen Sal k 3.0101; EC from Kali turgidum

50% id,
100% cov

metH: cobalamin-independent methionine synthase; EC from Emericella nidulans

50% id,
100% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory