Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 18 curated entries in PaperBLAST's database that match '2.3.1.35' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_12410: ornithine acetyltransferase
is similar to:
PaperBLAST

GNAT2_STRCL / P0DJQ5: Glutamate N-acetyltransferase 2; Ornithine acetyltransferase 2; Ornithine transacetylase 2; OATase 2; EC 2.3.1.35 from Streptomyces clavuligerus
P0DJQ5: glutamate N-acetyltransferase (EC 2.3.1.35) from Streptomyces clavuligerus

62% id,
99% cov

ARGJ_GEOSE / Q07908: Arginine biosynthesis bifunctional protein ArgJ; EC 2.3.1.35; EC 2.3.1.1 from Geobacillus stearothermophilus

41% id,
97% cov

ARGJ_METJA / Q57645: Glutamate N-acetyltransferase; Ornithine acetyltransferase; OATase; Ornithine transacetylase; EC 2.3.1.35 from Methanocaldococcus jannaschii

40% id,
98% cov

More...

AO356_17930: ornithine acetyltransferase
is similar to:
PaperBLAST

argJ: glutamate N-acetyltransferase/amino-acid acetyltransferase; EC 2.3.1.35 2.3.1.1 from Neisseria gonorrhoeae

51% id,
100% cov

Q92MJ1: glutamate N-acetyltransferase (EC 2.3.1.35) from Sinorhizobium meliloti

41% id,
96% cov

DVU0823: Glutamate N-acetyltransferase (EC 2.3.1.35) from Desulfovibrio vulgaris

39% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory