Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 66 curated entries in PaperBLAST's database that match '2.4.2.4'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
AO356_02940: hypothetical protein is similar to: | PaperBLAST |
PpnP / b0391: nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli | 57% id, 99% cov |
AO356_06690: queuine tRNA-ribosyltransferase is similar to: | PaperBLAST |
Q8THU2: tRNA-guanosine34 preQ1 transglycosylase (subunit 2/2) (EC 2.4.2.29); tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Methanosarcina acetivorans | 26% id, 66% cov |
ATGT_PYRFU / Q8TH08: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Pyrococcus furiosus | 24% id, 57% cov |
ATGT_METJA / Q57878: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Methanocaldococcus jannaschii | 26% id, 51% cov |
AO356_26335: dolichyl-phosphate-mannose-protein mannosyltransferase is similar to: | PaperBLAST |
ABF11690.1: 4-amino-4-deoxy-L-arabinosyltransferase (ArnT;ArnTCm;Rmet_4828) (EC 2.4.2.43) | 26% id, 59% cov |
AO356_22210: hypothetical protein is similar to: | PaperBLAST |
Q99N42: thymidine phosphorylase (EC 2.4.2.4) from Mus musculus | 25% id, 34% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
5963949-5965520 (frame +3) on CP012831 is similar to: | PaperBLAST |
ABF11690.1: 4-amino-4-deoxy-L-arabinosyltransferase (ArnT;ArnTCm;Rmet_4828) (EC 2.4.2.43) | 26% id, 66% cov |
5887477-5887950 (frame -1) on CP012831 is similar to: | PaperBLAST |
GXLT2_HUMAN / A0PJZ3: Glucoside xylosyltransferase 2; Glycosyltransferase 8 domain-containing protein 4; EC 2.4.2.42 from Homo sapiens | 36% id, 18% cov |
Lawrence Berkeley National Laboratory