Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 37 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_05215: glucokinase
is similar to:
PaperBLAST

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

84% id,
100% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC 2.7.1.2 from Escherichia coli
Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli

40% id,
98% cov

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

33% id,
96% cov

More...

AO356_23220: chemotaxis protein
is similar to:
PaperBLAST

PGA1_c05420: glucokinase (EC 2.7.1.2) from Phaeobacter inhibens

24% id,
62% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory