Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_00035: sugar kinase
is similar to:		 PaperBLAST

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

 100% id,
100% cov

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

 100% id,
99% cov

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

 50% id,
97% cov

More...

AO356_27700: fructokinase
is similar to:		 PaperBLAST

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

 84% id,
99% cov

PfGW456L13_3036: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

 81% id,
99% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

 37% id,
99% cov

More...

AO356_17825: enoyl-CoA hydratase
is similar to:		 PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

 45% id,
97% cov

AO356_30355: enoyl-CoA hydratase
is similar to:		 PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

 33% id,
98% cov

AO356_24685: 2-dehydro-3-deoxygluconokinase
is similar to:		 PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

 31% id,
98% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

 31% id,
98% cov

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

 31% id,
98% cov

More...

AO356_23520: fructoselysine kinase
is similar to:		 PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

 32% id,
91% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

 30% id,
85% cov

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

 26% id,
94% cov

More...

AO356_00950: ribokinase
is similar to:		 PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

 28% id,
99% cov

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

 28% id,
98% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

 28% id,
97% cov

More...

AO356_26360: enoyl-CoA hydratase
is similar to:		 PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

 27% id,
98% cov

AO356_27920: p-hydroxycinnamoyl CoA hydratase/lyase
is similar to:		 PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

 29% id,
87% cov

AO356_12440: epimerase
is similar to:		 PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

 26% id,
93% cov

AO356_25890: enoyl-CoA hydratase
is similar to:		 PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

 23% id,
96% cov

AO356_02330: multifunctional fatty acid oxidation complex subunit alpha
is similar to:		 PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

 22% id,
98% cov

AO356_23160: 5-dehydro-2-deoxygluconokinase
is similar to:		 PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

 23% id,
94% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

 34% id,
36% cov

AO356_28555: ketodeoxygluconokinase
is similar to:		 PaperBLAST

C4M2I2: fructokinase (EC 2.7.1.4) from Entamoeba histolytica

 25% id,
61% cov

AO356_07330: 1-phosphofructokinase
is similar to:		 PaperBLAST

Shewana3_0069: Fructokinase (EC 2.7.1.4) from Shewanella sp.

 28% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory