Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 12 curated entries in PaperBLAST's database that match '2.7.2.2' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_05280: carbamate kinase
is similar to:
PaperBLAST

O96432: carbamate kinase (EC 2.7.2.2) from Trichomonas vaginalis

46% id,
99% cov

CPKA_PYRFU / P95474: Carbamate kinase; Carbamate kinase-like carbamoylphosphate synthase; EC 2.7.2.2 from Pyrococcus furiosus
P95474: carbamate kinase (EC 2.7.2.2) from Pyrococcus furiosus

46% id,
98% cov

A8BB85: carbamate kinase (EC 2.7.2.2) from Giardia intestinalis

44% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory