Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 185 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 140 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_01250: alpha-amylase
is similar to:
PaperBLAST

Q9Z3R8: alpha-glucosidase (EC 3.2.1.20) from Sinorhizobium meliloti

33% id,
97% cov

Shewana3_2311: Alpha-glucosidase (EC 3.2.1.20) from Shewanella sp.

31% id,
99% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

33% id,
94% cov

More...

AO356_00745: glycosyl transferase family 1
is similar to:
PaperBLAST

Q2PCE3: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

28% id,
70% cov

AO356_20290: galactonate dehydratase
is similar to:
PaperBLAST

Q2PCE2: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

25% id,
73% cov

AO356_00765: glycosyl transferase
is similar to:
PaperBLAST

Q2PCE3: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

22% id,
47% cov

AO356_26020: malto-oligosyltrehalose trehalohydrolase
is similar to:
PaperBLAST

ABW98683.1: α-glucosidase / binding-toxin receptor (Agm3;AgAgm3) (EC 3.2.1.20)

28% id,
21% cov

CAB46746.1: α-glucosidase (maltase mal22) (EC 3.2.1.20)

32% id,
17% cov

AO356_26010: maltooligosyl trehalose synthase
is similar to:
PaperBLAST

MalZ / b0403: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
malZ / P21517: maltodextrin glucosidase (EC 3.2.1.20) from Escherichia coli
P21517: alpha-glucosidase (EC 3.2.1.20) from Escherichia coli

34% id,
16% cov

AIZ92452.1: α-glucosidase Z (EO53_16270;MalZ;b0403) (EC 3.2.1.20)
BAE76183.1: maltodextrin glucosidase (MalZ) (EC 3.2.1.20)

34% id,
16% cov

AO356_01255: alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase
is similar to:
PaperBLAST

MAL1_DROME / P07190: Maltase A1; Larval visceral protein H; EC 3.2.1.20 from Drosophila melanogaster
AAF59089.3: α-glucosidase H (LvpH; RE72980p) (EC 3.2.1.20)

30% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory