Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 241 curated entries in PaperBLAST's database that match '3.2.1.26' as complete word(s).

These curated entries have 195 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_28590: glycosyl hydrolase family 32
is similar to:
PaperBLAST

AAA24499.1: invertase (RafD) (EC 3.2.1.26)

45% id,
100% cov

AAC33123.1: invertase (CscA) (EC 3.2.1.26)
AAP79503.1: sucrose hydrolase (CscA) (EC 3.2.1.26)

46% id,
97% cov

CAA57219.1: invertase (CscA) (EC 3.2.1.26)

47% id,
96% cov

More...

AO356_15155: sucrase
is similar to:
PaperBLAST

INVB_ZYMMA / F8DT27: Extracellular sucrase; Beta-fructofuranosidase; Invertase; Protein B46; Saccharase; EC 3.2.1.26 from Zymomonas mobilis
AAV88999.1: invertase B (SacC;InvB;ZMO0375;SucE3) (EC 3.2.1.26)
AAA61488.1: invertase B (SacC,InvB,SucE3) (EC 3.2.1.26)

46% id,
95% cov

BAD18121.1: β-fructofuranosidase (Bff) (EC 2.4.1.10|3.2.1.26)

39% id,
83% cov

BAB72022.1: β-fructofuranosidase (Bff;BffA;ArFFase) (EC 3.2.1.26)

40% id,
77% cov

AO356_01250: alpha-amylase
is similar to:
PaperBLAST

ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum

28% id,
55% cov

AO356_19495: GntR family transcriptional regulator
is similar to:
PaperBLAST

BAB72022.1: β-fructofuranosidase (Bff;BffA;ArFFase) (EC 3.2.1.26)

35% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory