Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 134 curated entries in PaperBLAST's database that match '3.2.1.28' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_24205: trehalase is similar to:	PaperBLAST
AO356_24205: Alpha,alpha-trehalase (EC 3.2.1.28) from Pseudomonas fluorescens	100% id, 100% cov
Q3BXX2: alpha,alpha-trehalase (EC 3.2.1.28) from Xanthomonas campestris	63% id, 96% cov
Q63MI6: alpha,alpha-trehalase (EC 3.2.1.28) from Burkholderia pseudomallei	57% id, 91% cov
TREA_ECOLI / P13482: Periplasmic trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; Tre37A; EC 3.2.1.28 from Escherichia coli Tre / b1197: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli AAC74281.1: α,α-trehalase (periplasmic) (TreA;OsmA) (Tre37A) (EC 3.2.1.28) treA / P13482: periplasmic trehalase (EC 3.2.1.28) from Escherichia coli	54% id, 92% cov
D4I261: alpha,alpha-trehalase (EC 3.2.1.28) from Erwinia amylovora	51% id, 92% cov
TREF_ECOLI / P62601: Cytoplasmic trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Escherichia coli TreF / b3519: cytoplasmic trehalase (EC 3.2.1.28) from Escherichia coli AAC76544.1: trehalase (TreF;b3519) (EC 3.2.1.28) treF / P62601: cytoplasmic trehalase (EC 3.2.1.28) from Escherichia coli	50% id, 90% cov
TREA_RABIT / P19813: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Oryctolagus cuniculus AAA63460.1: trehalase (TreH;TreA) (EC 3.2.1.28)	36% id, 92% cov
AAF61430.1: trehalase (EC 3.2.1.28) Q9JLT2: alpha,alpha-trehalase (EC 3.2.1.28) from Mus musculus	35% id, 93% cov
Q9W2M2: alpha,alpha-trehalase (EC 3.2.1.28) from Drosophila melanogaster	33% id, 98% cov
BAA01951.1: trehalase (EC 3.2.1.28) P32359: alpha,alpha-trehalase (EC 3.2.1.28) from Tenebrio molitor	33% id, 99% cov
AGO32658.1: trehalase (Tre1;TmTre1) (soluble; midgut) (EC 3.2.1.28)	32% id, 99% cov
TREA_HUMAN / O43280: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Homo sapiens O43280: alpha,alpha-trehalase (EC 3.2.1.28) from Homo sapiens	35% id, 91% cov
ADT91708.1: trehalase (Tre-1) (EC 3.2.1.28) J7EJ73: alpha,alpha-trehalase (EC 3.2.1.28) from Chironomus riparius	33% id, 95% cov
BAA24381.1: trehalase (TreA;TreH) (EC 3.2.1.28)	35% id, 91% cov
AAD22970.1: trehalase 1 (Tre1) (EC 3.2.1.28) Q9XEY7: alpha,alpha-trehalase (EC 3.2.1.28) from Glycine max	34% id, 92% cov
AGL34007.2: membrane-bound trehalase (ALTre-2) (EC 3.2.1.28)	35% id, 87% cov
ACN85420.1: trehalase (Tre-1) (soluble) (EC 3.2.1.28) C0LZJ6: alpha,alpha-trehalase (EC 3.2.1.28) from Nilaparvata lugens	32% id, 95% cov
BAA02909.1: trehalase (Treh1) (EC 3.2.1.28) P32358: alpha,alpha-trehalase (EC 3.2.1.28) from Bombyx mori	32% id, 93% cov
D2KWM9: alpha,alpha-trehalase (EC 3.2.1.28) from Nicotiana tabacum	34% id, 88% cov
ABO20846.1: trehalase 1 (Treh-1) (EC 3.2.1.28)	32% id, 92% cov
A0A2S1WCH9: alpha,alpha-trehalase (EC 3.2.1.28) from Holothuria leucospilota	34% id, 88% cov
A0A0F6PB63: alpha,alpha-trehalase (EC 3.2.1.28) from Helicoverpa armigera	31% id, 94% cov
C0LZJ7: alpha,alpha-trehalase (EC 3.2.1.28) from Nilaparvata lugens	32% id, 91% cov
TREA_APIME / A8J4S9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Apis mellifera BAF81545.1: α,α-trehalase (EC 3.2.1.28) LOC410795 / A8J4S9: trehalase (bound form) (EC 3.2.1.28) from Apis mellifera A8J4S9: alpha,alpha-trehalase (EC 3.2.1.28) from Apis mellifera	33% id, 88% cov
ABY86218.1: trehalase-1 (Tre-1;SeTre-1) (EC 3.2.1.28) B0M0J3: alpha,alpha-trehalase (EC 3.2.1.28) from Spodoptera exigua	31% id, 92% cov
BAE45249.1: trehalase 2 (Treh2;Treh-2) (EC 3.2.1.28) Q3MV18: alpha,alpha-trehalase (EC 3.2.1.28) from Bombyx mori	34% id, 84% cov
D2KHJ0: alpha,alpha-trehalase (EC 3.2.1.28) from Spodoptera litura	31% id, 91% cov
ABE27189.1: trehalase (SfTre1) (soluble; midgut) (EC 3.2.1.28) Q0ZIF5: alpha,alpha-trehalase (EC 3.2.1.28) from Spodoptera frugiperda	31% id, 93% cov
ACF94698.1: trehalase (SfTre2) (EC 3.2.1.28) B5ATV4: alpha,alpha-trehalase (EC 3.2.1.28) from Spodoptera frugiperda	33% id, 84% cov
A0A0F6PAZ3: alpha,alpha-trehalase (EC 3.2.1.28) from Helicoverpa armigera	33% id, 86% cov
TRE1_ARATH / Q9SU50: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; Trehalase 1; AtTRE1; EC 3.2.1.28 from Arabidopsis thaliana CAB51647.1: trehalase (AtTre1;At4g24040/T19F6.30) (plasma membrane-bound) (EC 3.2.1.28) Q9SU50: alpha,alpha-trehalase (EC 3.2.1.28) from Arabidopsis thaliana	31% id, 90% cov
ABU95354.1: trehalase 2 (Tre-2;Treh-2;SeTre-2) (EC 3.2.1.28) A7XZC0: alpha,alpha-trehalase (EC 3.2.1.28) from Spodoptera exigua	33% id, 84% cov
A6MIZ4: alpha,alpha-trehalase (EC 3.2.1.28) from Physcomitrium patens	36% id, 76% cov
AGK89798.1: soluble trehalase (ALTre-1) (EC 3.2.1.28)	33% id, 84% cov
D2KHI9: alpha,alpha-trehalase (EC 3.2.1.28) from Spodoptera litura	32% id, 84% cov
Q9GYK9: alpha,alpha-trehalase (EC 3.2.1.28) from Caenorhabditis elegans	35% id, 76% cov
B0CV22: alpha,alpha-trehalase (EC 3.2.1.28) from Laccaria bicolor	29% id, 83% cov
TREA_KLULA / P49381: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; KlNTH1; EC 3.2.1.28 from Kluyveromyces lactis CAA57181.1: neutral trehalase (Nth1) (EC 3.2.1.28) CAG99815.1: neutral trehalase (TreA;KLLA0E17325g) (EC 3.2.1.28)	31% id, 56% cov
TREB_YEAST / P35172: Probable trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Saccharomyces cerevisiae CAA81270.1: neutral trehalase 2 (Nth2;YBR001c;YBR0106) (EC 3.2.1.28) NTH2 / P35172: cytosolic trehalase 2 (EC 3.2.1.28) from Saccharomyces cerevisiae	32% id, 54% cov
AAB99831.1: α,α-trehalase (TreB;AN5635.2) (EC 3.2.1.28) treB: Neutral trehalase (alpha,alpha-trehalase)(alpha,alpha-trehalose glucohydrolase); EC 3.2.1.28 from Emericella nidulans	31% id, 57% cov
TREB_EMENI / O42777: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Emericella nidulans O42777: alpha,alpha-trehalase (EC 3.2.1.28) from Aspergillus nidulans	31% id, 56% cov
BAG85338.1: trehalase (TreH) (EC 3.2.1.28) B6ZIV1: alpha,alpha-trehalase (EC 3.2.1.28) from Nostoc punctiforme	38% id, 45% cov
AAW44482.1: neutral trehalase 2 (NTH2;CNG00690) (EC 3.2.1.28)	27% id, 62% cov
TREA_SCHPO / O42893: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; Neutral trehalase; EC 3.2.1.28 from Schizosaccharomyces pombe CAA11904.1: neutral trehalase (Ntp1;SPBC660.07) (EC 3.2.1.28) ntp1: alpha,alpha-trehalase Ntp1; EC 3.2.1.28 from Schizosaccharomyces pombe	29% id, 56% cov
ABC59065.1: trehalase (TreA;Rmar_0119) (periplasmic) (EC 3.2.1.28) A1XBT9: alpha,alpha-trehalase (EC 3.2.1.28) from Rhodothermus marinus	34% id, 42% cov
BAG85338.1: trehalase (TreH) (EC 3.2.1.28) B6ZIV1: alpha,alpha-trehalase (EC 3.2.1.28) from Nostoc punctiforme	35% id, 38% cov
ABC59065.1: trehalase (TreA;Rmar_0119) (periplasmic) (EC 3.2.1.28) A1XBT9: alpha,alpha-trehalase (EC 3.2.1.28) from Rhodothermus marinus	39% id, 27% cov
TREA_YEAST / P32356: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Saccharomyces cerevisiae AAV19867.1: neutral trehalase 1 (Nth1;Nth;YDR001c;YD8119.07c) (EC 3.2.1.28) NTH1 / P32356: neutral trehalase subunit (EC 3.2.1.28) from Saccharomyces cerevisiae P32356: alpha,alpha-trehalase (EC 3.2.1.28) from Saccharomyces cerevisiae	28% id, 36% cov
TREA_BEAB2 / J5K1E2: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha-trehalose glucohydrolase; EC 3.2.1.28 from Beauveria bassiana ABM16911.1: neutral trehalase (Nth1;BbNTH1) (EC 3.2.1.28) A1YQE2: alpha,alpha-trehalase (EC 3.2.1.28) from Beauveria bassiana	30% id, 34% cov
AAS67888.1: neutral trehalase (Ntl) (EC 3.2.1.28) Q6Q5X7: alpha,alpha-trehalase (EC 3.2.1.28) from Metarhizium acridum	32% id, 24% cov
CAC17620.1: neutral trehalase (Nthi;Ntl1) (EC 3.2.1.28) AAT68667.1: neutral trehalase (NTL) (EC 3.2.1.28)	32% id, 24% cov
CAA64476.1: neutral trehalase (Ntc1;CaNTC1) (EC 3.2.1.28) P52494: alpha,alpha-trehalase (EC 3.2.1.28) from Candida albicans	34% id, 19% cov
TREA_BEAB2 / J5K1E2: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha-trehalose glucohydrolase; EC 3.2.1.28 from Beauveria bassiana ABM16911.1: neutral trehalase (Nth1;BbNTH1) (EC 3.2.1.28) A1YQE2: alpha,alpha-trehalase (EC 3.2.1.28) from Beauveria bassiana	41% id, 15% cov
A4QMP6: alpha,alpha-trehalase (EC 3.2.1.28) from Rhizophagus intraradices	43% id, 14% cov
CAK43979.1: trehalase B (TreB;An01g09290) (EC 3.2.1.28)	42% id, 14% cov
AAB88889.1: trehalase (EC 3.2.1.28)	41% id, 14% cov
TREB_PYRO7 / O42622: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Pyricularia oryzae AAN46743.1: neutral trehalase (NTH1) (EC 3.2.1.28) EAA53721.1: neutral trehalase (NTH1;MG09471.4) (EC 3.2.1.28)	41% id, 14% cov
AAC01744.1: trehalase (TreB) (EC 3.2.1.28)	40% id, 15% cov
B0DA99: alpha,alpha-trehalase (EC 3.2.1.28) from Laccaria bicolor	42% id, 14% cov
F8MBS5: alpha,alpha-trehalase (EC 3.2.1.28) from Neurospora tetrasperma	40% id, 14% cov
TREB_NEUCR / O42783: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Neurospora crassa O42783: alpha,alpha-trehalase (EC 3.2.1.28) from Neurospora crassa	40% id, 14% cov
AAW44482.1: neutral trehalase 2 (NTH2;CNG00690) (EC 3.2.1.28)	33% id, 16% cov
DAA05786.1: neutral trehalase (Nth1;CNAG_03785) (EC 3.2.1.28)	42% id, 12% cov
TREA_BOTFB / A0A384JRP0: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; Bctre1; EC 3.2.1.28 from Botryotinia fuckeliana	51% id, 10% cov
TREA_YEAST / P32356: Cytosolic neutral trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Saccharomyces cerevisiae AAV19867.1: neutral trehalase 1 (Nth1;Nth;YDR001c;YD8119.07c) (EC 3.2.1.28) NTH1 / P32356: neutral trehalase subunit (EC 3.2.1.28) from Saccharomyces cerevisiae P32356: alpha,alpha-trehalase (EC 3.2.1.28) from Saccharomyces cerevisiae	51% id, 10% cov
AAW41560.1: neutral trehalase 1 (NTH1;CNB02790) (EC 3.2.1.28)	41% id, 12% cov
More...

AO356_21075: glucoamylase is similar to:	PaperBLAST
TREH_MYCS2 / A0R0W9: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis ABK72415.1: α,α-trehalase (MSMEG_4535;MSMEG4528) (EC 3.2.1.28)	38% id, 92% cov
TREH_MYCTU / P71741: Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycobacterium tuberculosis	39% id, 90% cov
TREH1_SULAC / Q4J7W0: Trehalase 1; Alpha,alpha-trehalase; SaTreH1; EC 3.2.1.28 from Sulfolobus acidocaldarius A0A2Z5U3T3: alpha,alpha-trehalase (EC 3.2.1.28) from Sulfolobus acidocaldarius	34% id, 97% cov
TREH_THEVO / Q978S7: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma volcanium	34% id, 95% cov
TREH_THEAC / Q9HLE2: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum	32% id, 98% cov
TREH2_SULAC / Q4J9D4: Trehalase 2; Alpha,alpha-trehalase; SaTreH2; EC 3.2.1.28 from Sulfolobus acidocaldarius	33% id, 62% cov
TREH2_SULAC / Q4J9D4: Trehalase 2; Alpha,alpha-trehalase; SaTreH2; EC 3.2.1.28 from Sulfolobus acidocaldarius	30% id, 22% cov
TREH_THEAC / Q9HLE2: Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum	40% id, 14% cov
More...

AO356_01250: alpha-amylase is similar to:	PaperBLAST
Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae	33% id, 94% cov
AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20\|3.2.1.28)	35% id, 63% cov
AAS80455.1: α,α-trehalase / α-glucosidase (TTC0107) (EC 3.2.1.20\|3.2.1.28)	35% id, 23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

288074-291469 (frame -3) on CP012831 is similar to:	PaperBLAST
Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae Also see hits to annotated proteins above	33% id, 97% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory