Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 12 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_04095: agmatinase
is similar to:

gbuA / Q88EE2: guanidinobutyrase subunit (EC from Pseudomonas putida

93% id,
99% cov

GBUA_PSEAE / Q9I3S3: Guanidinobutyrase; EC from Pseudomonas aeruginosa
gbuA / Q9I3S3: guanidinobutyrase subunit (EC from Pseudomonas aeruginosa
Q9I3S3: guanidinobutyrase (EC from Pseudomonas aeruginosa

90% id,
100% cov

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC; EC; EC from Homo sapiens

63% id,
89% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory