Curated BLAST
Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 37 curated entries in PaperBLAST's database that match '3.5.99.6'.
These curated entries have 30 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
AO356_17545: iron dicitrate transport regulator FecR
is similar to: | PaperBLAST |
PfGW456L13_4831: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 88% id,
99% cov |
AO353_04455: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 87% id,
100% cov |
BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans | 67% id,
100% cov |
Ga0059261_1644: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Sphingomonas koreensis | 50% id,
96% cov |
CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Caulobacter crescentus | 48% id,
92% cov |
PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens | 43% id,
95% cov |
SO3506: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella oneidensis | 36% id,
98% cov |
Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp. | 36% id,
98% cov |
Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis | 36% id,
98% cov |
GLMD_THEKO / Q5JDU3: Glucosamine-6-phosphate deaminase; GlcN6P deaminase; EC 3.5.99.6 from Thermococcus kodakarensis
glmD / Q5JDU3: archaeal glucosamine-6-phosphate deaminase subunit (EC 3.5.99.6) from Thermococcus kodakarensis | 28% id,
98% cov |
More... |
AO356_11740: glucosamine--fructose-6-phosphate aminotransferase
is similar to: | PaperBLAST |
Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis | 32% id,
97% cov |
PfGW456L13_4831: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 30% id,
99% cov |
Ga0059261_1644: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Sphingomonas koreensis | 31% id,
95% cov |
Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp. | 30% id,
99% cov |
AO353_04455: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 30% id,
98% cov |
SO3506: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella oneidensis | 30% id,
99% cov |
PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens | 30% id,
97% cov |
CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Caulobacter crescentus | 32% id,
91% cov |
GLMD_THEKO / Q5JDU3: Glucosamine-6-phosphate deaminase; GlcN6P deaminase; EC 3.5.99.6 from Thermococcus kodakarensis
glmD / Q5JDU3: archaeal glucosamine-6-phosphate deaminase subunit (EC 3.5.99.6) from Thermococcus kodakarensis | 29% id,
99% cov |
BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans | 30% id,
91% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory