Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 4 curated entries in PaperBLAST's database that match '3.7.1.26' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_28735: ureidoglycolate lyase
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

77% id,
100% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

72% id,
100% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

72% id,
100% cov

More...

AO356_27435: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

60% id,
99% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

60% id,
99% cov

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

59% id,
99% cov

More...

AO356_00660: 5-carboxymethyl-2-hydroxymuconate isomerase
is similar to:
PaperBLAST

lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

37% id,
96% cov

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

36% id,
100% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

35% id,
100% cov

More...

AO356_25590: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
is similar to:
PaperBLAST

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

34% id,
100% cov

lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

36% id,
82% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

35% id,
75% cov

More...

AO356_29975: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
is similar to:
PaperBLAST

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

33% id,
100% cov

BMULJ_04921 / A0A0H3KT28: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Burkholderia multivorans

34% id,
97% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

31% id,
100% cov

More...

AO356_10310: hypothetical protein
is similar to:
PaperBLAST

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

33% id,
74% cov

C785_RS20550 / A0A2E7P912: 5-hydroxy-2,4-dioxopentanoate hydrolase (EC 3.7.1.26) from Herbaspirillum sp.

34% id,
72% cov

lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

33% id,
74% cov

AO356_20665: fumarylacetoacetate hydrolase
is similar to:
PaperBLAST

lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

31% id,
80% cov

AO356_25595: 4-hydroxyphenylacetate isomerase
is similar to:
PaperBLAST

lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

35% id,
71% cov

AO356_29105: fumarylacetoacetate hydrolase
is similar to:
PaperBLAST

lra6 / Q1NEI7: 2,4-didehydro-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

29% id,
65% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory