Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 4 curated entries in PaperBLAST's database that match '4.1.2.20' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
| AO356_25560: 2-keto-3-deoxy-L-rhamnonate aldolase is similar to: | PaperBLAST |
GARL_ECOLI / P23522: 5-keto-4-deoxy-D-glucarate aldolase; KDGluc aldolase; KDGlucA; 2-dehydro-3-deoxy-D-glucarate aldolase; 2-keto-3-deoxy-D-glucarate aldolase; 5-dehydro-4-deoxy-D-glucarate aldolase; Alpha-keto-beta-deoxy-D-glucarate aldolase; EC 4.1.2.20 from Escherichia coli | 46% id, 98% cov |
| AO356_26150: 2-dehydro-3-deoxyglucarate aldolase is similar to: | PaperBLAST |
GARL_ECOLI / P23522: 5-keto-4-deoxy-D-glucarate aldolase; KDGluc aldolase; KDGlucA; 2-dehydro-3-deoxy-D-glucarate aldolase; 2-keto-3-deoxy-D-glucarate aldolase; 5-dehydro-4-deoxy-D-glucarate aldolase; Alpha-keto-beta-deoxy-D-glucarate aldolase; EC 4.1.2.20 from Escherichia coli | 47% id, 95% cov |
| AO356_04530: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
P75682: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) from Escherichia coli | 30% id, 97% cov |
| AO356_06755: dihydrodipicolinate synthase is similar to: | PaperBLAST |
P75682: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) from Escherichia coli | 29% id, 96% cov |
| AO356_07185: 5-dehydro-4-deoxyglucarate dehydratase is similar to: | PaperBLAST |
P75682: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) from Escherichia coli | 26% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory