Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 7 curated entries in PaperBLAST's database that match '4.1.2.28' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
| AO356_04530: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
YJHH_ECOLI / P39359: Probable 2-dehydro-3-deoxy-D-pentonate aldolase YjhH; EC 4.1.2.28 from Escherichia coli | 30% id, 98% cov |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 30% id, 97% cov |
| AO356_06755: dihydrodipicolinate synthase is similar to: | PaperBLAST |
YJHH_ECOLI / P39359: Probable 2-dehydro-3-deoxy-D-pentonate aldolase YjhH; EC 4.1.2.28 from Escherichia coli | 31% id, 93% cov |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 29% id, 96% cov |
| AO356_24905: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
YJHH_ECOLI / P39359: Probable 2-dehydro-3-deoxy-D-pentonate aldolase YjhH; EC 4.1.2.28 from Escherichia coli | 29% id, 96% cov |
| AO356_07185: 5-dehydro-4-deoxyglucarate dehydratase is similar to: | PaperBLAST |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 26% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory