Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 63 curated entries in PaperBLAST's database that match '4.1.2.5'.
These curated entries have 33 distinct sequences.
Running ublast with E ≤ 0.01
Found 12 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
| AO356_13955: threonine aldolase is similar to: | PaperBLAST |
AO353_07670: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens | 94% id, 100% cov |
PfGW456L13_1114: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens | 93% id, 100% cov |
Q88R13: L-threonine aldolase (EC 4.1.2.5) from Pseudomonas putida | 85% id, 100% cov |
| AO356_21260: 6-carboxy-5,6,7,8-tetrahydropterin synthase is similar to: | PaperBLAST |
QUED_ECOLI / P65870: 6-carboxy-5,6,7,8-tetrahydropterin synthase; CPH4 synthase; Queuosine biosynthesis protein QueD; EC 4.1.2.50 from Escherichia coli | 75% id, 96% cov |
QUED_BACSU / O31676: 6-carboxy-5,6,7,8-tetrahydropterin synthase; CPH4 synthase; Queuosine biosynthesis protein QueD; EC 4.1.2.50 from Bacillus subtilis | 32% id, 84% cov |
| AO356_25560: 2-keto-3-deoxy-L-rhamnonate aldolase is similar to: | PaperBLAST |
HPCH_ECOLX / Q47098: 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; HHED aldolase; 4-hydroxy-2-ketoheptane-1,7-dioate aldolase; HKHD aldolase; EC 4.1.2.52 from Escherichia coli | 67% id, 99% cov |
RHMA_ECOLI / P76469: 2-keto-3-deoxy-L-rhamnonate aldolase; KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase; 2-keto-3-deoxy acid sugar aldolase; EC 4.1.2.53 from Escherichia coli | 59% id, 98% cov |
KDSGA_PSEPU / P0DOV8: 2-dehydro-3,6-dideoxy-6-sulfogluconate aldolase; 2-keto-3,6-dideoxy-6-sulfogluconate aldolase; KDSG aldolase; EC 4.1.2.58 from Pseudomonas putida | 44% id, 98% cov |
| AO356_18765: threonine aldolase is similar to: | PaperBLAST |
LtaA / b0870: low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.5; EC 4.1.2.26; EC 4.1.2.49) from Escherichia coli | 58% id, 99% cov |
Q9X266: L-threonine aldolase (EC 4.1.2.5) from Thermotoga maritima | 46% id, 99% cov |
GLY1 / GB|AAA72430.1: threonine aldolase; EC 4.1.2.5 from Saccharomyces cerevisiae | 38% id, 86% cov |
| AO356_26150: 2-dehydro-3-deoxyglucarate aldolase is similar to: | PaperBLAST |
HPCH_ECOLX / Q47098: 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; HHED aldolase; 4-hydroxy-2-ketoheptane-1,7-dioate aldolase; HKHD aldolase; EC 4.1.2.52 from Escherichia coli | 53% id, 99% cov |
RHMA_ECOLI / P76469: 2-keto-3-deoxy-L-rhamnonate aldolase; KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase; 2-keto-3-deoxy acid sugar aldolase; EC 4.1.2.53 from Escherichia coli | 52% id, 94% cov |
KDSGA_PSEPU / P0DOV8: 2-dehydro-3,6-dideoxy-6-sulfogluconate aldolase; 2-keto-3,6-dideoxy-6-sulfogluconate aldolase; KDSG aldolase; EC 4.1.2.58 from Pseudomonas putida | 37% id, 100% cov |
| AO356_07855: hypothetical protein is similar to: | PaperBLAST |
Q9X266: L-threonine aldolase (EC 4.1.2.5) from Thermotoga maritima | 45% id, 100% cov |
LtaA / b0870: low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.5; EC 4.1.2.26; EC 4.1.2.49) from Escherichia coli | 32% id, 99% cov |
GLY1 / GB|AAA72430.1: threonine aldolase; EC 4.1.2.5 from Saccharomyces cerevisiae | 34% id, 86% cov |
| AO356_20285: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase is similar to: | PaperBLAST |
YidU / b4477: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (EC 4.1.2.55; EC 4.1.2.21) from Escherichia coli | 46% id, 94% cov |
kdgA / P38448: 2-dehydro-3-deoxy-D-gluconate-6-phosphate aldolase (EC 4.1.2.55) from Dickeya dadantii | 33% id, 75% cov |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 36% id, 67% cov |
| AO356_05150: keto-deoxy-phosphogluconate aldolase is similar to: | PaperBLAST |
Kga / b1850: KHG/KDPG aldolase (EC 4.1.2.55; EC 4.1.2.14; EC 4.1.3.42; EC 4.1.1.112) from Escherichia coli | 45% id, 94% cov |
kdgA / P38448: 2-dehydro-3-deoxy-D-gluconate-6-phosphate aldolase (EC 4.1.2.55) from Dickeya dadantii | 44% id, 94% cov |
TM0066 / Q9WXS1: 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16; EC 4.1.2.55) from Thermotoga maritima | 29% id, 99% cov |
| AO356_13705: fructose-1,6-bisphosphate aldolase is similar to: | PaperBLAST |
SQIA_ALKUR / A0A2P6MHY1: Sulfofructosephosphate aldolase; SFP aldolase; EC 4.1.2.57 from Alkalicoccus urumqiensis | 34% id, 99% cov |
| AO356_04530: 4-hydroxy-tetrahydrodipicolinate synthase is similar to: | PaperBLAST |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 30% id, 97% cov |
KDGA_PICTO / Q6KZI8: 2-dehydro-3-deoxy-D-gluconate/2-dehydro-3-deoxy-phosphogluconate aldolase; 2-dehydro-3-deoxy-galactonate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC 4.1.2.14; EC 4.1.2.51; EC 4.1.2.-; EC 4.1.2.21 from Picrophilus torridus | 28% id, 87% cov |
| AO356_06755: dihydrodipicolinate synthase is similar to: | PaperBLAST |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 29% id, 96% cov |
KDGA_THETE / Q704D1: 2-dehydro-3-deoxy-D-gluconate/2-dehydro-3-deoxy-phosphogluconate aldolase; KD(P)G aldolase; EC 4.1.2.14; EC 4.1.2.51 from Thermoproteus tenax | 29% id, 91% cov |
| AO356_07185: 5-dehydro-4-deoxyglucarate dehydratase is similar to: | PaperBLAST |
YAGE_ECOLI / P75682: Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE; KDG aldolase YagE; Putative 2-dehydro-3-deoxy-D-pentonate aldolase YagE; EC 4.1.2.51; EC 4.1.2.28 from Escherichia coli | 26% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 14 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory