Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 13 curated entries in PaperBLAST's database that match '4.2.1.18' as complete word(s).
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 16 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
AO356_01590: gamma-carboxygeranoyl-CoA hydratase is similar to: | PaperBLAST |
AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 100% id, 100% cov |
Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 99% id, 100% cov |
liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida | 75% id, 100% cov |
AO356_30295: fatty-acid oxidation protein subunit alpha is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 36% id, 100% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 35% id, 95% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 38% id, 72% cov |
AO356_26360: enoyl-CoA hydratase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 33% id, 98% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 32% id, 92% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 36% id, 79% cov |
AO356_30355: enoyl-CoA hydratase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 31% id, 100% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 30% id, 99% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 34% id, 82% cov |
AO356_25890: enoyl-CoA hydratase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 30% id, 98% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 30% id, 94% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 27% id, 96% cov |
AO356_20400: 3-hydroxyacyl-CoA dehydrogenase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 40% id, 73% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 34% id, 64% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 31% id, 59% cov |
AO356_27920: p-hydroxycinnamoyl CoA hydratase/lyase is similar to: | PaperBLAST |
Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 32% id, 90% cov |
AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 32% id, 90% cov |
SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti | 29% id, 97% cov |
AO356_26370: crotonase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 29% id, 95% cov |
AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 26% id, 97% cov |
Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 26% id, 81% cov |
AO356_26645: crotonase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 31% id, 91% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 35% id, 77% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 34% id, 78% cov |
AO356_17825: enoyl-CoA hydratase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 28% id, 94% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 27% id, 98% cov |
AO356_02330: multifunctional fatty acid oxidation complex subunit alpha is similar to: | PaperBLAST |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 35% id, 75% cov |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 37% id, 70% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 38% id, 67% cov |
AO356_24105: hydroxymethylglutaryl-CoA lyase is similar to: | PaperBLAST |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 48% id, 51% cov |
AO356_04640: enoyl-CoA hydratase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 28% id, 88% cov |
AO356_01570: hydroxymethylglutaryl-CoA lyase is similar to: | PaperBLAST |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 49% id, 49% cov |
AO356_30360: 3-hydroxypropionyl-CoA dehydratase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 32% id, 70% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 27% id, 73% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 26% id, 76% cov |
AO356_12440: epimerase is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 25% id, 84% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 24% id, 79% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 28% id, 69% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 16 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
503525-505738 (frame -3) on CP012831 is similar to: | PaperBLAST |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 34% id, 79% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens | 33% id, 75% cov |
Lawrence Berkeley National Laboratory