Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 14 curated entries in PaperBLAST's database that match '4.2.1.25' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
| AO356_24585: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
AO356_24585: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 100% id, 100% cov |
Pf6N2E2_609: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 99% id, 100% cov |
PfGW456L13_3320: L-arabonate dehydratase (EC 4.2.1.25) from Pseudomonas fluorescens | 97% id, 100% cov |
| AO356_28760: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 46% id, 99% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 46% id, 96% cov |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 44% id, 99% cov |
| AO356_20290: galactonate dehydratase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 36% id, 97% cov |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 31% id, 89% cov |
| AO356_13250: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 30% id, 92% cov |
SM_b20890: L-arabonate dehydratase (EC 4.2.1.25) from Sinorhizobium meliloti | 35% id, 58% cov |
HSERO_RS05205: L-arabonate dehydratase (EC 4.2.1.25) from Herbaspirillum seropedicae | 32% id, 61% cov |
| AO356_05220: phosphogluconate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 31% id, 84% cov |
Shewana3_2070: L-arabonate dehydratase (EC 4.2.1.25) from Shewanella sp. | 30% id, 84% cov |
BPHYT_RS19730: L-arabonate dehydratase (EC 4.2.1.25) from Burkholderia phytofirmans | 29% id, 84% cov |
| AO356_28550: bifunctional D-altronate/D-mannonate dehydratase is similar to: | PaperBLAST |
xacD / D4GP40: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Haloferax volcanii | 29% id, 86% cov |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 30% id, 34% cov |
| AO356_06875: mandelate racemase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 26% id, 88% cov |
| AO356_26155: rhamnonate dehydratase is similar to: | PaperBLAST |
SSO26655 / Q97VG1: D-xylonate dehydratase subunit (EC 4.2.1.25; EC 4.2.1.82) from Saccharolobus solfataricus | 25% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory