Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 4 curated entries in PaperBLAST's database that match '4.2.1.7' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
AO356_07170: galactarate dehydratase is similar to: | PaperBLAST |
UXAA_ECOLI / P42604: Altronate dehydratase; D-altronate hydro-lyase; EC 4.2.1.7 from Escherichia coli | 35% id, 99% cov |
CA265_RS19875: Altronate dehydratase (EC 4.2.1.7) from Pedobacter sp. | 35% id, 61% cov |
AO356_27460: galactonate dehydratase is similar to: | PaperBLAST |
UXAA_ECOLI / P42604: Altronate dehydratase; D-altronate hydro-lyase; EC 4.2.1.7 from Escherichia coli | 36% id, 97% cov |
CA265_RS19875: Altronate dehydratase (EC 4.2.1.7) from Pedobacter sp. | 39% id, 66% cov |
AO356_24195: galactonate dehydratase is similar to: | PaperBLAST |
UXAA_ECOLI / P42604: Altronate dehydratase; D-altronate hydro-lyase; EC 4.2.1.7 from Escherichia coli | 36% id, 95% cov |
CA265_RS19875: Altronate dehydratase (EC 4.2.1.7) from Pedobacter sp. | 36% id, 66% cov |
CA265_RS19875: Altronate dehydratase (EC 4.2.1.7) from Pedobacter sp. | 31% id, 24% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory