Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 20 curated entries in PaperBLAST's database that match '4.2.1.91' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_25650: ArtI protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa
Q01269: arogenate dehydratase (EC 4.2.1.91) from Pseudomonas aeruginosa

50% id,
91% cov

AO356_03465: prephenate dehydratase
is similar to:
PaperBLAST

AROD2_ARATH / Q9SSE7: Arogenate dehydratase/prephenate dehydratase 2, chloroplastic; AtADT2; AtPDT2; EC 4.2.1.51; EC 4.2.1.91 from Arabidopsis thaliana
Q9SSE7: arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana

33% id,
87% cov

AROD1_ARATH / Q9SA96: Arogenate dehydratase/prephenate dehydratase 1, chloroplastic; AtADT1; AtPDT1; EC 4.2.1.51; EC 4.2.1.91 from Arabidopsis thaliana
Q9SA96: arogenate dehydratase (EC 4.2.1.91) from Arabidopsis thaliana

29% id,
89% cov

AROD2_PETHY / D3U716: Arogenate dehydratase 2; PhADT2; Prephenate dehydratase ADT3; EC 4.2.1.91; EC 4.2.1.51 from Petunia hybrida
D3U716: arogenate dehydratase (EC 4.2.1.91) from Petunia x

35% id,
72% cov

More...

AO356_01470: ABC transporter substrate-binding protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa
Q01269: arogenate dehydratase (EC 4.2.1.91) from Pseudomonas aeruginosa

28% id,
70% cov

AO356_17350: ABC transporter substrate-binding protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa
Q01269: arogenate dehydratase (EC 4.2.1.91) from Pseudomonas aeruginosa

27% id,
71% cov

AO356_10405: glutamine ABC transporter substrate-binding protein
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa
Q01269: arogenate dehydratase (EC 4.2.1.91) from Pseudomonas aeruginosa

26% id,
67% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory