Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 31 curated entries in PaperBLAST's database that match '4.3.1.19'.

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_10330: threonine dehydratase is similar to:	PaperBLAST
ILVA_ECOLI / P04968: L-threonine dehydratase biosynthetic IlvA; Threonine deaminase; EC 4.3.1.19 from Escherichia coli Ile / b3772: threonine deaminase (EC 4.3.1.19) from Escherichia coli ilvA / P04968: threonine deaminase (EC 4.3.1.19) from Escherichia coli P04968: threonine ammonia-lyase (EC 4.3.1.19) from Escherichia coli	53% id, 97% cov
THDH_YEAST / P00927: Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19 from Saccharomyces cerevisiae	52% id, 89% cov
V6QU65: threonine ammonia-lyase (EC 4.3.1.19) from Fusarium graminearum	50% id, 87% cov
TD1_SOLLC / A0FKE6: Threonine dehydratase 1 biosynthetic, chloroplastic; SlTD1; Threonine deaminase 1; EC 4.3.1.19 from Solanum lycopersicum	53% id, 82% cov
TD_SOLTU / P31212: Threonine dehydratase biosynthetic, chloroplastic; Threonine deaminase; EC 4.3.1.19 from Solanum tuberosum	42% id, 100% cov
TD_NICAT / Q9AXU4: Threonine dehydratase; Threonine deaminase; EC 4.3.1.19 from Nicotiana attenuata Q9AXU4: threonine ammonia-lyase (EC 4.3.1.19) from Nicotiana attenuata	50% id, 83% cov
THDH_SCHPO / O94634: Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19 from Schizosaccharomyces pombe	49% id, 84% cov
TD2_SOLLC / P25306: Threonine dehydratase 2 biosynthetic, chloroplastic; SlTD2; Threonine deaminase 2; EC 4.3.1.17; EC 4.3.1.19 from Solanum lycopersicum	46% id, 84% cov
TDCB_SALTY / P11954: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Salmonella typhimurium	40% id, 94% cov
TDCB_ECOLI / P0AGF6: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Escherichia coli Tdc / b3117: catabolic threonine dehydratase (EC 4.3.1.17; EC 4.3.1.19) from Escherichia coli tdcB / RF\|NP_417587: threonine ammonia-lyase; EC 4.3.1.19 from Escherichia coli tdcB / P0AGF6: catabolic threonine dehydratase (EC 4.3.1.17; EC 4.3.1.19) from Escherichia coli	39% id, 94% cov
CA265_RS15860: threonine deaminase (EC 4.3.1.19) from Pedobacter sp.	38% id, 95% cov
Q04513: threonine ammonia-lyase (EC 4.3.1.19) from Corynebacterium glutamicum	39% id, 92% cov
A0QX60: threonine ammonia-lyase (EC 4.3.1.19) from Mycolicibacterium smegmatis	39% id, 92% cov
TSAL_THEMA / Q9WYJ1: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine dehydratase; EC 4.3.1.19; EC 4.3.1.17 from Thermotoga maritima	40% id, 86% cov
CCNA_03750: threonine deaminase (EC 4.3.1.19) from Caulobacter crescentus	36% id, 94% cov
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens Q74FW6: threonine ammonia-lyase (EC 4.3.1.19) from Geobacter sulfurreducens	37% id, 90% cov
Ga0059261_3694: threonine deaminase (EC 4.3.1.19) from Sphingomonas koreensis	35% id, 92% cov
SDHL_HUMAN / P20132: L-serine dehydratase/L-threonine deaminase; SDH; L-serine deaminase; L-threonine dehydratase; TDH; EC 4.3.1.17; EC 4.3.1.19 from Homo sapiens SDS / P20132: L-serine dehydratase (EC 4.3.1.19; EC 4.3.1.17) from Homo sapiens	32% id, 95% cov
SDSL_HUMAN / Q96GA7: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; Serine dehydratase 2; SDH 2; EC 4.3.1.19; EC 4.3.1.17 from Homo sapiens SDSL / Q96GA7: Serine dehydratase-like (EC 4.3.1.19; EC 4.3.1.17) from Homo sapiens	30% id, 95% cov
SDSL_MOUSE / Q8R238: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; SDH; EC 4.3.1.17; EC 4.3.1.19 from Mus musculus	29% id, 94% cov
More...

AO356_27710: threonine dehydratase is similar to:	PaperBLAST
TDCB_SALTY / P11954: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Salmonella typhimurium	39% id, 95% cov
TDCB_ECOLI / P0AGF6: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Escherichia coli Tdc / b3117: catabolic threonine dehydratase (EC 4.3.1.17; EC 4.3.1.19) from Escherichia coli tdcB / RF\|NP_417587: threonine ammonia-lyase; EC 4.3.1.19 from Escherichia coli tdcB / P0AGF6: catabolic threonine dehydratase (EC 4.3.1.17; EC 4.3.1.19) from Escherichia coli	39% id, 94% cov
ILVA_ECOLI / P04968: L-threonine dehydratase biosynthetic IlvA; Threonine deaminase; EC 4.3.1.19 from Escherichia coli Ile / b3772: threonine deaminase (EC 4.3.1.19) from Escherichia coli ilvA / P04968: threonine deaminase (EC 4.3.1.19) from Escherichia coli P04968: threonine ammonia-lyase (EC 4.3.1.19) from Escherichia coli	55% id, 62% cov
SDSL_HUMAN / Q96GA7: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; Serine dehydratase 2; SDH 2; EC 4.3.1.19; EC 4.3.1.17 from Homo sapiens SDSL / Q96GA7: Serine dehydratase-like (EC 4.3.1.19; EC 4.3.1.17) from Homo sapiens	34% id, 97% cov
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens Q74FW6: threonine ammonia-lyase (EC 4.3.1.19) from Geobacter sulfurreducens	43% id, 75% cov
TSAL_THEMA / Q9WYJ1: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine dehydratase; EC 4.3.1.19; EC 4.3.1.17 from Thermotoga maritima	42% id, 75% cov
A0QX60: threonine ammonia-lyase (EC 4.3.1.19) from Mycolicibacterium smegmatis	39% id, 79% cov
Q04513: threonine ammonia-lyase (EC 4.3.1.19) from Corynebacterium glutamicum	41% id, 73% cov
SDHL_HUMAN / P20132: L-serine dehydratase/L-threonine deaminase; SDH; L-serine deaminase; L-threonine dehydratase; TDH; EC 4.3.1.17; EC 4.3.1.19 from Homo sapiens SDS / P20132: L-serine dehydratase (EC 4.3.1.19; EC 4.3.1.17) from Homo sapiens	31% id, 96% cov
TD1_SOLLC / A0FKE6: Threonine dehydratase 1 biosynthetic, chloroplastic; SlTD1; Threonine deaminase 1; EC 4.3.1.19 from Solanum lycopersicum	56% id, 53% cov
SDSL_MOUSE / Q8R238: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; SDH; EC 4.3.1.17; EC 4.3.1.19 from Mus musculus	31% id, 96% cov
CCNA_03750: threonine deaminase (EC 4.3.1.19) from Caulobacter crescentus	40% id, 75% cov
THDH_YEAST / P00927: Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19 from Saccharomyces cerevisiae	52% id, 57% cov
CA265_RS15860: threonine deaminase (EC 4.3.1.19) from Pedobacter sp.	40% id, 73% cov
V6QU65: threonine ammonia-lyase (EC 4.3.1.19) from Fusarium graminearum	52% id, 56% cov
TD_NICAT / Q9AXU4: Threonine dehydratase; Threonine deaminase; EC 4.3.1.19 from Nicotiana attenuata Q9AXU4: threonine ammonia-lyase (EC 4.3.1.19) from Nicotiana attenuata	52% id, 55% cov
Ga0059261_3694: threonine deaminase (EC 4.3.1.19) from Sphingomonas koreensis	39% id, 73% cov
THDH_SCHPO / O94634: Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19 from Schizosaccharomyces pombe	51% id, 54% cov
TD2_SOLLC / P25306: Threonine dehydratase 2 biosynthetic, chloroplastic; SlTD2; Threonine deaminase 2; EC 4.3.1.17; EC 4.3.1.19 from Solanum lycopersicum	50% id, 54% cov
TD_SOLTU / P31212: Threonine dehydratase biosynthetic, chloroplastic; Threonine deaminase; EC 4.3.1.19 from Solanum tuberosum	49% id, 50% cov
More...

AO356_23665: hypothetical protein is similar to:	PaperBLAST
TSAL_THEMA / Q9WYJ1: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine dehydratase; EC 4.3.1.19; EC 4.3.1.17 from Thermotoga maritima	35% id, 78% cov
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens Q74FW6: threonine ammonia-lyase (EC 4.3.1.19) from Geobacter sulfurreducens	38% id, 69% cov
SDSL_MOUSE / Q8R238: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; SDH; EC 4.3.1.17; EC 4.3.1.19 from Mus musculus	28% id, 92% cov
CCNA_03750: threonine deaminase (EC 4.3.1.19) from Caulobacter crescentus	33% id, 78% cov
Ga0059261_3694: threonine deaminase (EC 4.3.1.19) from Sphingomonas koreensis	34% id, 74% cov
ILVA_ECOLI / P04968: L-threonine dehydratase biosynthetic IlvA; Threonine deaminase; EC 4.3.1.19 from Escherichia coli Ile / b3772: threonine deaminase (EC 4.3.1.19) from Escherichia coli ilvA / P04968: threonine deaminase (EC 4.3.1.19) from Escherichia coli P04968: threonine ammonia-lyase (EC 4.3.1.19) from Escherichia coli	35% id, 58% cov
TD2_SOLLC / P25306: Threonine dehydratase 2 biosynthetic, chloroplastic; SlTD2; Threonine deaminase 2; EC 4.3.1.17; EC 4.3.1.19 from Solanum lycopersicum	34% id, 47% cov
V6QU65: threonine ammonia-lyase (EC 4.3.1.19) from Fusarium graminearum	32% id, 50% cov
THDH_YEAST / P00927: Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19 from Saccharomyces cerevisiae	31% id, 50% cov
TD1_SOLLC / A0FKE6: Threonine dehydratase 1 biosynthetic, chloroplastic; SlTD1; Threonine deaminase 1; EC 4.3.1.19 from Solanum lycopersicum	33% id, 47% cov
TD_NICAT / Q9AXU4: Threonine dehydratase; Threonine deaminase; EC 4.3.1.19 from Nicotiana attenuata Q9AXU4: threonine ammonia-lyase (EC 4.3.1.19) from Nicotiana attenuata	33% id, 47% cov
THDH_SCHPO / O94634: Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19 from Schizosaccharomyces pombe	30% id, 50% cov
TD_SOLTU / P31212: Threonine dehydratase biosynthetic, chloroplastic; Threonine deaminase; EC 4.3.1.19 from Solanum tuberosum	30% id, 46% cov
More...

AO356_16855: threonine synthase is similar to:	PaperBLAST
TDCB_SALTY / P11954: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Salmonella typhimurium	25% id, 86% cov
TDCB_ECOLI / P0AGF6: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Escherichia coli Tdc / b3117: catabolic threonine dehydratase (EC 4.3.1.17; EC 4.3.1.19) from Escherichia coli tdcB / RF\|NP_417587: threonine ammonia-lyase; EC 4.3.1.19 from Escherichia coli tdcB / P0AGF6: catabolic threonine dehydratase (EC 4.3.1.17; EC 4.3.1.19) from Escherichia coli	25% id, 86% cov
TSAL_THEMA / Q9WYJ1: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine dehydratase; EC 4.3.1.19; EC 4.3.1.17 from Thermotoga maritima	27% id, 67% cov
ILVA_ECOLI / P04968: L-threonine dehydratase biosynthetic IlvA; Threonine deaminase; EC 4.3.1.19 from Escherichia coli Ile / b3772: threonine deaminase (EC 4.3.1.19) from Escherichia coli ilvA / P04968: threonine deaminase (EC 4.3.1.19) from Escherichia coli P04968: threonine ammonia-lyase (EC 4.3.1.19) from Escherichia coli	27% id, 56% cov
More...

AO356_10915: tryptophan synthase subunit beta is similar to:	PaperBLAST
Q04513: threonine ammonia-lyase (EC 4.3.1.19) from Corynebacterium glutamicum	25% id, 70% cov
TD1_SOLLC / A0FKE6: Threonine dehydratase 1 biosynthetic, chloroplastic; SlTD1; Threonine deaminase 1; EC 4.3.1.19 from Solanum lycopersicum	27% id, 36% cov

AO356_19050: cysteine synthase is similar to:	PaperBLAST
TD1_SOLLC / A0FKE6: Threonine dehydratase 1 biosynthetic, chloroplastic; SlTD1; Threonine deaminase 1; EC 4.3.1.19 from Solanum lycopersicum	26% id, 37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory