Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 38 curated entries in PaperBLAST's database that match '4.4.1.5'.

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_22815: lactoylglutathione lyase
is similar to:
PaperBLAST

gloA / P16635: glyoxalase I monomer (EC 4.4.1.5) from Pseudomonas putida

82% id,
100% cov

Q88GF8: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas putida

83% id,
99% cov

Q9HU72: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas aeruginosa

59% id,
91% cov

More...

AO356_04780: glutamine amidotransferase
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana

56% id,
50% cov

AO356_06825: lactoylglutathione lyase
is similar to:
PaperBLAST

Q9HY85: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas aeruginosa

28% id,
96% cov

LGUL_ECOLI / P0AC81: Lactoylglutathione lyase; Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase; EC 4.4.1.5 from Escherichia coli
GloA / b1651: glyoxalase I (EC 4.4.1.5) from Escherichia coli
gloA / RF|NP_416168.1: lactoylglutathione lyase; EC 4.4.1.5 from Shigella flexneri
gloA / P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli
P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli

27% id,
91% cov

P0A0T3: lactoylglutathione lyase (EC 4.4.1.5) from Neisseria meningitidis

27% id,
89% cov

More...

AO356_21040: dimethylglycine dehydrogenase
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana

32% id,
31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory