Curated BLAST

Curated BLAST for Genomes

Found 1 curated entries in PaperBLAST's database that match '2,4-diketo-3-deoxy-L-rhamnonate hydrolase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_28735: ureidoglycolate lyase is similar to:	PaperBLAST
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans	76% id, 100% cov

AO356_27435: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase is similar to:	PaperBLAST
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans	61% id, 100% cov

AO356_00660: 5-carboxymethyl-2-hydroxymuconate isomerase is similar to:	PaperBLAST
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans	37% id, 96% cov

AO356_25590: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase is similar to:	PaperBLAST
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans	34% id, 98% cov

AO356_29975: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase is similar to:	PaperBLAST
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans	34% id, 96% cov

AO356_25595: 4-hydroxyphenylacetate isomerase is similar to:	PaperBLAST
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans	34% id, 75% cov

AO356_10310: hypothetical protein is similar to:	PaperBLAST
BPHYT_RS34210: 2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) from Burkholderia phytofirmans	37% id, 63% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory