Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 3 curated entries in PaperBLAST's database that match 'ATP-dependent reduction of co(II)balamin' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

6603454-6604086 (frame +1) on CP012831
is similar to:
PaperBLAST

DvMF_1398: ATP-dependent reduction of co(II)balamin (RamA-like) from Desulfovibrio vulgaris

28% id,
24% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory