Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)

Found 3 curated entries in PaperBLAST's database that match 'N-succinylglutamylphosphate reductase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query

AO356_14490: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

Echvi_3847: N-succinylglutamylphosphate reductase (EC 1.2.1.-) from Echinicola vietnamensis

39% id,
97% cov

CA265_RS18540: N-succinylglutamylphosphate reductase (EC 1.2.1.38) from Pedobacter sp.

37% id,
98% cov

BT3759: N-succinylglutamylphosphate reductase (EC 1.2.1.-) from Bacteroides thetaiotaomicron

36% id,
98% cov

AO356_24070: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

CA265_RS18540: N-succinylglutamylphosphate reductase (EC 1.2.1.38) from Pedobacter sp.

26% id,
87% cov

Echvi_3847: N-succinylglutamylphosphate reductase (EC 1.2.1.-) from Echinicola vietnamensis

29% id,
74% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory