Searching in Pseudomonas fluorescens FW300-N2C3 (pseudo5_N2C3_1)
Found 6 curated entries in PaperBLAST's database that match 'hisF' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2C3, or try another query
AO356_09795: imidazole glycerol phosphate synthase subunit HisF is similar to: | PaperBLAST |
HIS6_THET8 / Q7SIB9: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermus thermophilus | 59% id, 99% cov |
1h5yB / Q8ZY16: Hisf protein from pyrobaculum aerophilum | 55% id, 99% cov |
HIS6_THEMA / Q9X0C6: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermotoga maritima | 52% id, 98% cov |
AO356_03380: glycosyl amidation-associated protein WbuZ is similar to: | PaperBLAST |
1h5yB / Q8ZY16: Hisf protein from pyrobaculum aerophilum | 44% id, 90% cov |
HIS6_THEMA / Q9X0C6: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermotoga maritima | 41% id, 91% cov |
HIS6_THET8 / Q7SIB9: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermus thermophilus | 42% id, 90% cov |
AO356_09800: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase is similar to: | PaperBLAST |
1h5yB / Q8ZY16: Hisf protein from pyrobaculum aerophilum | 31% id, 94% cov |
HIS6_THET8 / Q7SIB9: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermus thermophilus | 26% id, 93% cov |
AO356_22745: 2-nitropropane dioxygenase is similar to: | PaperBLAST |
HIS6_THET8 / Q7SIB9: Imidazole glycerol phosphate synthase subunit HisF; IGP synthase cyclase subunit; IGP synthase subunit HisF; ImGP synthase subunit HisF; IGPS subunit HisF; EC 4.3.2.10 from Thermus thermophilus | 28% id, 48% cov |
1h5yB / Q8ZY16: Hisf protein from pyrobaculum aerophilum | 31% id, 33% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory