Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 4 curated entries in PaperBLAST's database that match '1.1.1.312' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
| Pf6N2E2_1791: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) is similar to: | PaperBLAST |
Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni | 25% id, 93% cov |
proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea | 27% id, 73% cov |
| Pf6N2E2_885: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) is similar to: | PaperBLAST |
Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni | 24% id, 92% cov |
proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea | 25% id, 77% cov |
| Pf6N2E2_518: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) is similar to: | PaperBLAST |
Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni | 26% id, 45% cov |
proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea | 25% id, 45% cov |
| Pf6N2E2_1441: Uncharacterized oxidoreductase ydgJ (EC 1.-.-.-) is similar to: | PaperBLAST |
LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp. | 24% id, 46% cov |
Q93PS4: 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase (EC 1.1.1.312) from Comamonas testosteroni | 30% id, 23% cov |
proD / Q75T27: α-hydroxy-γ-carboxymuconate ε-semialdehyde dehydrogenase subunit (EC 1.1.1.312) from Pseudomonas straminea | 30% id, 23% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1035436-1036488 (frame -1) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
LIGC_SPHSK / Q9KWL3: 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; CHMS dehydrogenase; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase; EC 1.1.1.312 from Sphingobium sp. | 27% id, 92% cov |
Lawrence Berkeley National Laboratory