Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 3 curated entries in PaperBLAST's database that match '1.1.1.368'.
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
| Pf6N2E2_5980: Alcohol dehydrogenase (EC 1.1.1.1) is similar to: | PaperBLAST |
HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica | 31% id, 56% cov |
| Pf6N2E2_1522: Alcohol dehydrogenase (EC 1.1.1.1) is similar to: | PaperBLAST |
HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica | 33% id, 51% cov |
| Pf6N2E2_4723: Threonine dehydrogenase and related Zn-dependent dehydrogenases is similar to: | PaperBLAST |
HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica | 30% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1780021-1781079 (frame +1) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
HAD_THAAR / O87871: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; EC 1.1.1.368 from Thauera aromatica | 30% id, 58% cov |
Lawrence Berkeley National Laboratory