Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 4 curated entries in PaperBLAST's database that match '1.1.1.59' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
Pf6N2E2_2094: Choline dehydrogenase (EC 1.1.99.1) is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 59% id, 94% cov |
Pf6N2E2_4677: Choline dehydrogenase (EC 1.1.99.1) is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 40% id, 94% cov |
Pf6N2E2_1907: Choline dehydrogenase (EC 1.1.99.1) is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 40% id, 93% cov |
Pf6N2E2_4819: Alcohol dehydrogenase (EC 1.1.1.1) is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 30% id, 94% cov |
Pf6N2E2_2802: Alcohol dehydrogenase (EC 1.1.1.1) is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 31% id, 92% cov |
Pf6N2E2_1380: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) is similar to: | PaperBLAST |
pydE / A0A0A3J5T1: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59; EC 1.1.1.298) from Ureibacillus massiliensis | 28% id, 95% cov |
Pf6N2E2_389: Choline dehydrogenase (EC 1.1.99.1) is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 38% id, 53% cov |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 38% id, 31% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
5410303-5412210 (frame -1) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 39% id, 97% cov |
457003-458643 (frame -1) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
dddA / C8YX89: 3-hydroxypropionate dehydrogenase (EC 1.1.1.59) from Halomonas sp. | 36% id, 59% cov |
Lawrence Berkeley National Laboratory