Curated BLAST
Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 15 curated entries in PaperBLAST's database that match '1.1.99.39' as complete word(s).
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
Pf6N2E2_3933: D-2-hydroxyglutarate dehydrogenase
is similar to: | PaperBLAST |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 92% id,
100% cov |
Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa | 89% id,
100% cov |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 54% id,
97% cov |
D2HDH_HUMAN / Q8N465: D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Homo sapiens
D2HGDH / Q8N465: D-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.39) from Homo sapiens
Q8N465: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Homo sapiens | 37% id,
85% cov |
SMc04384: (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Sinorhizobium meliloti | 31% id,
98% cov |
D2HDH_RAT / P84850: D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Rattus norvegicus | 36% id,
83% cov |
D2HDH_ARATH / O23240: D-2-hydroxyglutarate dehydrogenase, mitochondrial; AtD-2HGDH; EC 1.1.99.39 from Arabidopsis thaliana | 33% id,
81% cov |
More... |
Pf6N2E2_1497: D-2-hydroxyglutarate dehydrogenase
is similar to: | PaperBLAST |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 40% id,
98% cov |
SMc04384: (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Sinorhizobium meliloti | 35% id,
97% cov |
Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa | 35% id,
99% cov |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 35% id,
99% cov |
D2HDH_RAT / P84850: D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Rattus norvegicus | 37% id,
85% cov |
D2HDH_HUMAN / Q8N465: D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Homo sapiens
D2HGDH / Q8N465: D-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.39) from Homo sapiens
Q8N465: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Homo sapiens | 38% id,
79% cov |
D2HDH_ARATH / O23240: D-2-hydroxyglutarate dehydrogenase, mitochondrial; AtD-2HGDH; EC 1.1.99.39 from Arabidopsis thaliana | 37% id,
81% cov |
More... |
Pf6N2E2_137: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
is similar to: | PaperBLAST |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 31% id,
97% cov |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 29% id,
98% cov |
Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa | 28% id,
99% cov |
D2HDH_HUMAN / Q8N465: D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Homo sapiens
D2HGDH / Q8N465: D-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.39) from Homo sapiens
Q8N465: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Homo sapiens | 30% id,
89% cov |
D2HDH_RAT / P84850: D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Rattus norvegicus | 29% id,
86% cov |
D2HDH_PSEPK / Q88EH0: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Pseudomonas putida
ydiJ / Q88EH0: (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas putida
PP_4493: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas putida | 27% id,
22% cov |
D2HDH_ECOLI / P77748: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Escherichia coli
ydiJ / P77748: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Escherichia coli | 30% id,
14% cov |
More... |
Pf6N2E2_3385: Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing
is similar to: | PaperBLAST |
Q9I6H4: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas aeruginosa | 23% id,
100% cov |
D2HDH_STUS1 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Stutzerimonas stutzeri | 22% id,
100% cov |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 27% id,
62% cov |
D2HDH_ARATH / O23240: D-2-hydroxyglutarate dehydrogenase, mitochondrial; AtD-2HGDH; EC 1.1.99.39 from Arabidopsis thaliana | 29% id,
48% cov |
D2HDH_HUMAN / Q8N465: D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Homo sapiens
D2HGDH / Q8N465: D-2-hydroxyglutarate dehydrogenase, mitochondrial (EC 1.1.99.39) from Homo sapiens
Q8N465: D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Homo sapiens | 25% id,
26% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory