Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 23 curated entries in PaperBLAST's database that match '1.13.12.2'.
These curated entries have 19 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
| Pf6N2E2_4778: Lysine 2-monooxygenase (EC 1.13.12.2) is similar to: | PaperBLAST |
Pf6N2E2_4778: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens | 100% id, 100% cov |
AO356_14230: lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens | 99% id, 100% cov |
AO353_07420: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens | 95% id, 100% cov |
| Pf6N2E2_5280: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases is similar to: | PaperBLAST |
CLOR_STRRC / Q8GHB1: 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase; Bifunctional non-heme iron oxygenase; Clorobiocin biosynthesis protein CloR; EC 1.13.11.83; EC 1.13.12.23 from Streptomyces roseochromogenus | 32% id, 73% cov |
novR / Q9L9F0: 3-dimethylallyl-4-hydroxyphenylpyruvate oxygenase (EC 1.13.12.23; EC 1.13.11.83) from Streptomyces niveus | 30% id, 75% cov |
| Pf6N2E2_1029: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases is similar to: | PaperBLAST |
CLOR_STRRC / Q8GHB1: 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase; Bifunctional non-heme iron oxygenase; Clorobiocin biosynthesis protein CloR; EC 1.13.11.83; EC 1.13.12.23 from Streptomyces roseochromogenus | 36% id, 62% cov |
novR / Q9L9F0: 3-dimethylallyl-4-hydroxyphenylpyruvate oxygenase (EC 1.13.12.23; EC 1.13.11.83) from Streptomyces niveus | 33% id, 63% cov |
| Pf6N2E2_5211: Possible monoamine oxidase is similar to: | PaperBLAST |
PfGW456L13_1171: Lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas fluorescens | 38% id, 13% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3702543-3703364 (frame +3) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
novR / Q9L9F0: 3-dimethylallyl-4-hydroxyphenylpyruvate oxygenase (EC 1.13.12.23; EC 1.13.11.83) from Streptomyces niveus | 32% id, 86% cov |
Lawrence Berkeley National Laboratory