Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 3 curated entries in PaperBLAST's database that match '1.2.1.77'.

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_4679: Betaine aldehyde dehydrogenase (EC 1.2.1.8)
is similar to:
PaperBLAST

Q13WK4: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (NADP+) (EC 1.2.1.77) from Paraburkholderia xenovorans

28% id,
96% cov

Pf6N2E2_1370: Putative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28)
is similar to:
PaperBLAST

BOXD_AROEV / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase; EC 1.2.1.77 from Aromatoleum evansii
boxD / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase monomer (EC 1.2.1.77) from Aromatoleum evansii

28% id,
91% cov

Pf6N2E2_4014: Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
is similar to:
PaperBLAST

BOXD_AROEV / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase; EC 1.2.1.77 from Aromatoleum evansii
boxD / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase monomer (EC 1.2.1.77) from Aromatoleum evansii

27% id,
95% cov

Pf6N2E2_3298: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
is similar to:
PaperBLAST

BOXD_AROEV / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase; EC 1.2.1.77 from Aromatoleum evansii
boxD / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase monomer (EC 1.2.1.77) from Aromatoleum evansii

30% id,
83% cov

Pf6N2E2_1102: Aldehyde dehydrogenase A (EC 1.2.1.22)
is similar to:
PaperBLAST

Q13WK4: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (NADP+) (EC 1.2.1.77) from Paraburkholderia xenovorans

26% id,
92% cov

Pf6N2E2_1751: Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21)
is similar to:
PaperBLAST

Q13WK4: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (NADP+) (EC 1.2.1.77) from Paraburkholderia xenovorans

25% id,
92% cov

Pf6N2E2_3685: Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
is similar to:
PaperBLAST

BOXD_AROEV / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase; EC 1.2.1.77 from Aromatoleum evansii
boxD / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase monomer (EC 1.2.1.77) from Aromatoleum evansii

26% id,
86% cov

Q13WK4: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (NADP+) (EC 1.2.1.77) from Paraburkholderia xenovorans

25% id,
88% cov

Pf6N2E2_368: Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
is similar to:
PaperBLAST

Q13WK4: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (NADP+) (EC 1.2.1.77) from Paraburkholderia xenovorans

28% id,
79% cov

Pf6N2E2_225: Putative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28)
is similar to:
PaperBLAST

Q13WK4: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (NADP+) (EC 1.2.1.77) from Paraburkholderia xenovorans

22% id,
98% cov

Pf6N2E2_1067: Glyceraldehyde-3-phosphate dehydrogenase, putative
is similar to:
PaperBLAST

BOXD_AROEV / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase; EC 1.2.1.77 from Aromatoleum evansii
boxD / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase monomer (EC 1.2.1.77) from Aromatoleum evansii

25% id,
84% cov

Q13WK4: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (NADP+) (EC 1.2.1.77) from Paraburkholderia xenovorans

24% id,
87% cov

Pf6N2E2_3582: L-pipecolate dehydrogenase (EC 1.5.99.3)
is similar to:
PaperBLAST

Q13WK4: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (NADP+) (EC 1.2.1.77) from Paraburkholderia xenovorans

27% id,
68% cov

BOXD_AROEV / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase; EC 1.2.1.77 from Aromatoleum evansii
boxD / Q84HH8: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase monomer (EC 1.2.1.77) from Aromatoleum evansii

29% id,
57% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory