Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
Pf6N2E2_3675: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 54% id, 83% cov |
Pf6N2E2_2518: Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) / 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) is similar to: | PaperBLAST |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 41% id, 92% cov |
TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis | 39% id, 95% cov |
O67636: prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus | 40% id, 89% cov |
Pf6N2E2_5856: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 36% id, 64% cov |
Pf6N2E2_479: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 32% id, 67% cov |
Pf6N2E2_2520: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 33% id, 57% cov |
Pf6N2E2_4437: Twin-arginine translocation protein TatB is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 29% id, 32% cov |
Pf6N2E2_2781: Urea carboxylase (EC 6.3.4.6) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 32% id, 17% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
2970897-2973152 (frame -2) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 40% id, 94% cov |
Lawrence Berkeley National Laboratory