Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 1 curated entries in PaperBLAST's database that match '1.3.99.10' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
| Pf6N2E2_2191: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 64% id, 87% cov |
| Pf6N2E2_5333: Butyryl-CoA dehydrogenase (EC 1.3.99.2) is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 37% id, 90% cov |
| Pf6N2E2_1146: Butyryl-CoA dehydrogenase (EC 1.3.99.2) is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 37% id, 88% cov |
| Pf6N2E2_1148: Butyryl-CoA dehydrogenase (EC 1.3.99.2) is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 36% id, 83% cov |
| Pf6N2E2_4036: Glutaryl-CoA dehydrogenase (EC 1.3.99.7) is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 34% id, 88% cov |
| Pf6N2E2_1855: Butyryl-CoA dehydrogenase (EC 1.3.99.2) is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 33% id, 88% cov |
| Pf6N2E2_2410: Citronellyl-CoA dehydrogenase is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 33% id, 88% cov |
| Pf6N2E2_3686: Acyl-CoA dehydrogenase (EC 1.3.8.7) is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 28% id, 78% cov |
| Pf6N2E2_5026: Acyl-CoA dehydrogenase (EC 1.3.8.7) is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 26% id, 63% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 6128151-6129542 (frame +3) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 36% id, 93% cov |
| 2199643-2200848 (frame +1) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans | 32% id, 92% cov |
Lawrence Berkeley National Laboratory