Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 108 curated entries in PaperBLAST's database that match '1.4.1.2'.
These curated entries have 87 distinct sequences.
Running ublast with E ≤ 0.01
Found 19 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
Pf6N2E2_634: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form is similar to: | PaperBLAST |
DHE2_PSEAE / Q9HZE0: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Pseudomonas aeruginosa | 84% id, 100% cov |
Psest_1944: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form from Pseudomonas stutzeri | 72% id, 100% cov |
DHE2_HALED / E1V4J5: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Halomonas elongata | 52% id, 99% cov |
Pf6N2E2_4486: Glycine cleavage system H protein is similar to: | PaperBLAST |
P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli | 62% id, 99% cov |
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp. | 45% id, 93% cov |
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii | 57% id, 71% cov |
Pf6N2E2_5558: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) is similar to: | PaperBLAST |
P33195: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Escherichia coli | 61% id, 99% cov |
Q94B78: glycine cleavage system (subunit 4/5) (EC 1.4.1.27) from Arabidopsis thaliana | 57% id, 92% cov |
P26969: glycine cleavage system (subunit 3/4) (EC 1.4.1.27) from Pisum sativum | 57% id, 91% cov |
Pf6N2E2_4485: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) is similar to: | PaperBLAST |
P27248: glycine cleavage system (subunit 3/3) (EC 1.4.1.27) from Escherichia coli | 54% id, 100% cov |
Q5NHP0: glycine cleavage system (EC 1.4.1.27) from Francisella tularensis | 50% id, 99% cov |
Q9WY54: glycine cleavage system (EC 1.4.1.27) from Thermotoga maritima | 40% id, 98% cov |
Pf6N2E2_5399: Ornithine cyclodeaminase (EC 4.3.1.12) is similar to: | PaperBLAST |
DAUB_PSEAE / Q9HXE4: NAD(P)H-dependent anabolic L-arginine dehydrogenase DauB; EC 1.4.1.25 from Pseudomonas aeruginosa | 71% id, 73% cov |
Pf6N2E2_4251: Dihydrolipoamide dehydrogenase (EC 1.8.1.4) is similar to: | PaperBLAST |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 56% id, 90% cov |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 55% id, 91% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 55% id, 90% cov |
Pf6N2E2_5556: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) is similar to: | PaperBLAST |
P28337: glycine cleavage system (subunit 1/3) (EC 1.4.1.27) from Gallus gallus | 48% id, 95% cov |
P48728: glycine cleavage system (subunit 2/4) (EC 1.4.1.27) from Homo sapiens | 47% id, 92% cov |
P49364: glycine cleavage system (subunit 1/4) (EC 1.4.1.27) from Pisum sativum | 45% id, 92% cov |
Pf6N2E2_5559: Glycine cleavage system H protein is similar to: | PaperBLAST |
P0A6T9: glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli | 48% id, 95% cov |
P11183: H-protein-(lipoyl)lysine (EC 1.4.1.27) from Gallus gallus | 47% id, 75% cov |
GCSH / P23434: glycine cleavage system H protein, mitochondrial (EC 1.4.1.27) from Homo sapiens | 48% id, 73% cov |
Pf6N2E2_5857: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) is similar to: | PaperBLAST |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 49% id, 91% cov |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 48% id, 92% cov |
O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus | 48% id, 91% cov |
Pf6N2E2_5294: Leucine dehydrogenase (EC 1.4.1.9) is similar to: | PaperBLAST |
VDH_STRCO / Q06539: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces coelicolor | 44% id, 92% cov |
VDH_STRA4 / O69056: Valine dehydrogenase; ValDH; EC 1.4.1.23 from Streptomyces albus | 43% id, 92% cov |
DHPH_RHOSO / Q59771: Phenylalanine dehydrogenase; PheDH; EC 1.4.1.20 from Rhodococcus sp. | 38% id, 92% cov |
Pf6N2E2_478: Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4) is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 37% id, 96% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 39% id, 91% cov |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 38% id, 92% cov |
Pf6N2E2_446: Glutathione reductase (EC 1.8.1.7) is similar to: | PaperBLAST |
P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp. | 31% id, 97% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 32% id, 89% cov |
O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus | 32% id, 89% cov |
Pf6N2E2_2274: Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 31% id, 96% cov |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 33% id, 91% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 33% id, 90% cov |
Pf6N2E2_4720: Sarcosine oxidase alpha subunit (EC 1.5.3.1) is similar to: | PaperBLAST |
Q9WY54: glycine cleavage system (EC 1.4.1.27) from Thermotoga maritima | 26% id, 98% cov |
Pf6N2E2_448: Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 27% id, 67% cov |
O08749: glycine cleavage system (subunit 1/2) (EC 1.4.1.27) from Mus musculus | 27% id, 62% cov |
P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens | 27% id, 41% cov |
Pf6N2E2_4702: DgcA Dimethylglycine demethylase subunit A is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 22% id, 69% cov |
Pf6N2E2_5398: Ornithine cyclodeaminase (EC 4.3.1.12) is similar to: | PaperBLAST |
DAUB_PSEAE / Q9HXE4: NAD(P)H-dependent anabolic L-arginine dehydrogenase DauB; EC 1.4.1.25 from Pseudomonas aeruginosa | 73% id, 19% cov |
Pf6N2E2_1861: Ferredoxin reductase is similar to: | PaperBLAST |
P72740: glycine cleavage system (subunit 2/2) (EC 1.4.1.27) from Synechocystis sp. | 28% id, 39% cov |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 26% id, 41% cov |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 25% id, 37% cov |
Pf6N2E2_2914: P-hydroxybenzoate hydroxylase (EC 1.14.13.2) is similar to: | PaperBLAST |
P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli | 30% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 18 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
4946269-4947696 (frame -1) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
Q9M5K3: glycine cleavage system (subunit 5/5) (EC 1.4.1.27) from Arabidopsis thaliana | 56% id, 93% cov |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 54% id, 94% cov |
510298-511944 (frame +1) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum | 27% id, 64% cov |
Lawrence Berkeley National Laboratory