Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 43 curated entries in PaperBLAST's database that match '1.4.3.21' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_4632: Amine oxidase [flavin-containing] (EC 1.4.3.4)
is similar to:
PaperBLAST

AOFA_MOUSE / Q64133: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

26% id,
86% cov

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

25% id,
87% cov

AOFB_BOVIN / P56560: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Bos taurus

25% id,
87% cov

More...

Pf6N2E2_359: Opine oxidase subunit B
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

28% id,
26% cov

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

48% id,
8% cov

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

45% id,
8% cov

More...

Pf6N2E2_1875: Protoporphyrinogen oxidase (EC 1.3.3.4)
is similar to:
PaperBLAST

AOFB_BOVIN / P56560: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Bos taurus

32% id,
21% cov

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

31% id,
19% cov

AOF_DANRE / Q6NSN2: Amine oxidase [flavin-containing]; Monoamine oxidase; MAO; Z-MAO; EC 1.4.3.21; EC 1.4.3.4 from Danio rerio

36% id,
16% cov

More...

Pf6N2E2_3581: L-pipecolate oxidase (1.5.3.7)
is similar to:
PaperBLAST

AOFA_HUMAN / P21397: Amine oxidase [flavin-containing] A; Monoamine oxidase type A; MAO-A; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens

35% id,
18% cov

AOF_DANRE / Q6NSN2: Amine oxidase [flavin-containing]; Monoamine oxidase; MAO; Z-MAO; EC 1.4.3.21; EC 1.4.3.4 from Danio rerio

40% id,
13% cov

Pf6N2E2_4388: Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)
is similar to:
PaperBLAST

AOFB_MOUSE / Q8BW75: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

36% id,
16% cov

AOFB_RAT / P19643: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Rattus norvegicus

36% id,
16% cov

AOFB_HUMAN / P27338: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Homo sapiens
MAOB / P27338: monoamine oxidase B subunit (EC 1.4.3.21; EC 1.4.3.4) from Homo sapiens

36% id,
16% cov

More...

Pf6N2E2_352: Opine oxidase subunit B
is similar to:
PaperBLAST

AOFB_MOUSE / Q8BW75: Amine oxidase [flavin-containing] B; Monoamine oxidase type B; MAO-B; EC 1.4.3.21; EC 1.4.3.4 from Mus musculus

39% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory