Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 5 curated entries in PaperBLAST's database that match '1.4.3.25' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_4632: Amine oxidase [flavin-containing] (EC 1.4.3.4)
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

26% id,
89% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

25% id,
79% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

24% id,
83% cov

Pf6N2E2_1875: Protoporphyrinogen oxidase (EC 1.3.3.4)
is similar to:
PaperBLAST

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

22% id,
51% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

54% id,
7% cov

Pf6N2E2_5211: Possible monoamine oxidase
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

27% id,
31% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

34% id,
13% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

27% id,
16% cov

Pf6N2E2_4702: DgcA Dimethylglycine demethylase subunit A
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

34% id,
22% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

35% id,
14% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

41% id,
10% cov

Pf6N2E2_4672: FIG00953568: hypothetical protein
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

28% id,
20% cov

Pf6N2E2_4186: Glycine oxidase ThiO (EC 1.4.3.19)
is similar to:
PaperBLAST

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

25% id,
22% cov

Pf6N2E2_5231: COG3380: Amine oxidase, flavin-containing
is similar to:
PaperBLAST

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

25% id,
21% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

27% id,
19% cov

Pf6N2E2_2209: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

35% id,
14% cov

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

46% id,
7% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

42% id,
7% cov

Pf6N2E2_3723: FIG022199: FAD-binding protein
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

41% id,
12% cov

Pf6N2E2_4720: Sarcosine oxidase alpha subunit (EC 1.5.3.1)
is similar to:
PaperBLAST

P72346: L-amino-acid oxidase (EC 1.4.3.2); L-arginine oxidase (EC 1.4.3.25) from Synechococcus elongatus

43% id,
11% cov

Pf6N2E2_365: Ferredoxin reductase
is similar to:
PaperBLAST

OXLA_HUMAN / Q96RQ9: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; hIL4I1; Protein Fig-1; hFIG1; EC 1.4.3.2; EC 1.4.3.25 from Homo sapiens

44% id,
9% cov

OXLA_MOUSE / O09046: L-amino-acid oxidase; LAAO; LAO; Interleukin-4-induced protein 1; IL4-induced protein 1; mIL4I1; Protein Fig-1; mFIG1; EC 1.4.3.2; EC 1.4.3.25 from Mus musculus

42% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory