Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_2289: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

P28790: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Pseudomonas fragi

96% id,
98% cov

fadA / Q88L01: FadA (EC 2.3.1.16; EC 2.3.1.9) from Pseudomonas putida

94% id,
98% cov

fadA / Q9HZJ3: fatty acid oxidation complex β subunit (EC 2.3.1.16) from Pseudomonas aeruginosa

92% id,
98% cov

More...

Pf6N2E2_2113: Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

93% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

68% id,
100% cov

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

67% id,
100% cov

More...

Pf6N2E2_2835: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

90% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

47% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

46% id,
100% cov

More...

Pf6N2E2_1145: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
is similar to:
PaperBLAST

PfGW456L13_2982: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Pseudomonas fluorescens

90% id,
99% cov

AO353_25685: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Pseudomonas fluorescens

89% id,
99% cov

Mpe_A3367 / A2SL81: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methylibium petroleiphilum

62% id,
99% cov

More...

Pf6N2E2_2539: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
is similar to:
PaperBLAST

FADA_BACSU / O32177: 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis

47% id,
100% cov

fadA / Q88L01: FadA (EC 2.3.1.16; EC 2.3.1.9) from Pseudomonas putida

42% id,
99% cov

fadA / Q9HZJ3: fatty acid oxidation complex β subunit (EC 2.3.1.16) from Pseudomonas aeruginosa

42% id,
99% cov

More...

Pf6N2E2_5999: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

fadA / A0A140NDQ6: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

40% id,
100% cov

Sama_0031: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella amazonensis

40% id,
100% cov

FADA_ECOLI / P21151: 3-ketoacyl-CoA thiolase FadA; Acetyl-CoA acyltransferase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta; EC 2.3.1.16 from Escherichia coli
OldA / b3845: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
fadA / P21151: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli
P21151: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Escherichia coli

40% id,
100% cov

More...

Pf6N2E2_1851: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

39% id,
99% cov

FADA_BACSU / O32177: 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis

38% id,
99% cov

FADA6_MYCTU / I6XHJ3: Steroid 3-ketoacyl-CoA thiolase FadA6; Acetyl-CoA acetyltransferase FadA6; EC 2.3.1.16 from Mycobacterium tuberculosis
fadA6 / I6XHJ3: 3-oxo-acyl CoA thiolase (EC 2.3.1.16) from Mycobacterium tuberculosis

40% id,
95% cov

More...

Pf6N2E2_3492: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
is similar to:
PaperBLAST

FADI_ECOLI / P76503: 3-ketoacyl-CoA thiolase FadI; ACSs; Acetyl-CoA acyltransferase; Acyl-CoA ligase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta; EC 2.3.1.16 from Escherichia coli
FadI / b2342: 3-ketoacyl-CoA thiolase FadI (EC 2.3.1.16) from Escherichia coli
fadI / P76503: 3-ketoacyl-CoA thiolase FadI (EC 2.3.1.16) from Escherichia coli
fadI / A0A140N9I7: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

39% id,
97% cov

fadA / Q5P5K2: 3-keto-acyl-CoA-thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

36% id,
99% cov

ECHB_MOUSE / Q99JY0: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Mus musculus

37% id,
89% cov

More...

Pf6N2E2_1836: Lipid carrier protein or keto acyl-CoA thiolase Ltp3 (EC 2.3.1.16)
is similar to:
PaperBLAST

mvaE / A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methanothermococcus thermolithotrophicus

33% id,
97% cov

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

31% id,
99% cov

Q66Q58: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Spodoptera littoralis

30% id,
71% cov

More...

Pf6N2E2_2290: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
94% cov

Pf6N2E2_1850: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

33% id,
94% cov

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
25% cov

Pf6N2E2_6000: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

32% id,
94% cov

Pf6N2E2_1922: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

31% id,
94% cov

Pf6N2E2_1923: Acetyl-CoA acetyltransferase
is similar to:
PaperBLAST

mvaE / A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methanothermococcus thermolithotrophicus

28% id,
96% cov

Q66Q58: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Spodoptera littoralis

27% id,
74% cov

Pf6N2E2_1675: Lipid carrier protein or keto acyl-CoA thiolase Ltp3 (EC 2.3.1.16)
is similar to:
PaperBLAST

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

29% id,
79% cov

Q66Q58: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Spodoptera littoralis

26% id,
76% cov

Pf6N2E2_3894: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

33% id,
53% cov

Pf6N2E2_1833: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / Enoyl CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

30% id,
45% cov

Pf6N2E2_1722: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

37% id,
37% cov

Pf6N2E2_1147: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

39% id,
23% cov

Pf6N2E2_1834: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

38% id,
23% cov

Pf6N2E2_1269: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

31% id,
24% cov

Pf6N2E2_1934: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

26% id,
27% cov

Pf6N2E2_1013: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

24% id,
27% cov

Pf6N2E2_835: 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

57% id,
8% cov

Msed_0656 / A4YEH9: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Metallosphaera sedula

39% id,
8% cov

Pf6N2E2_888: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

29% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 24 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2189854-2192061 (frame -1) on unitig_0|quiver.unitig_1|quiver|pilon
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

33% id,
95% cov

1344309-1345193 (frame +3) on unitig_0|quiver.unitig_1|quiver|pilon
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

35% id,
29% cov

1495095-1495916 (frame -2) on unitig_0|quiver.unitig_1|quiver|pilon
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

30% id,
25% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory