Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 16 curated entries in PaperBLAST's database that match '2.6.1.39' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 29 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_5269: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

77% id,
100% cov

Pf6N2E2_1496: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

49% id,
96% cov

Pf6N2E2_373: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

45% id,
100% cov

Pf6N2E2_4013: 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

42% id,
99% cov

Pf6N2E2_5813: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

38% id,
97% cov

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

38% id,
97% cov

AADAT_MOUSE / Q9WVM8: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Mus musculus
Q9WVM8: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Mus musculus

27% id,
97% cov

More...

Pf6N2E2_1623: Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

33% id,
99% cov

Pf6N2E2_5326: Acetylornithine aminotransferase (EC 2.6.1.11)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

34% id,
96% cov

Pf6N2E2_2395: Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

33% id,
99% cov

Pf6N2E2_5665: Succinylornithine transaminase (EC 2.6.1.81)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

34% id,
95% cov

Pf6N2E2_462: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

33% id,
96% cov

Pf6N2E2_4631: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

30% id,
98% cov

Pf6N2E2_1742: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

31% id,
94% cov

Pf6N2E2_4386: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

31% id,
95% cov

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

31% id,
95% cov

Pf6N2E2_3173: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

29% id,
95% cov

Pf6N2E2_2862: Uncharacterized PLP-dependent aminotransferase YfdZ
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

30% id,
93% cov

Pf6N2E2_637: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

30% id,
92% cov

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

30% id,
90% cov

Pf6N2E2_5161: Valine--pyruvate aminotransferase (EC 2.6.1.66) ## AvtA
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

29% id,
95% cov

Pf6N2E2_5022: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

33% id,
82% cov

Pf6N2E2_3877: 4-aminobutyrate aminotransferase (EC 2.6.1.19)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

27% id,
98% cov

Pf6N2E2_684: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

33% id,
81% cov

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

33% id,
81% cov

Aadat / Q64602: α-aminoadipate aminotransferase subunit (EC 2.6.1.39) from Rattus norvegicus

27% id,
85% cov

More...

Pf6N2E2_2127: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

28% id,
94% cov

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

28% id,
94% cov

Pf6N2E2_4512: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

28% id,
96% cov

Pf6N2E2_2446: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti

28% id,
92% cov

Pf6N2E2_1739: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

31% id,
77% cov

Pf6N2E2_3463: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
is similar to:
PaperBLAST

Q88FI7: 4-aminobutyrate aminotransferase (EC 2.6.1.39) from Pseudomonas putida
PP_4108: 2-aminoadipate transaminase (EC 2.6.1.39) from Pseudomonas putida

28% id,
86% cov

Pf6N2E2_5989: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

Aadat / Q64602: α-aminoadipate aminotransferase subunit (EC 2.6.1.39) from Rattus norvegicus

28% id,
81% cov

AADAT_MOUSE / Q9WVM8: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Mus musculus
Q9WVM8: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Mus musculus

28% id,
81% cov

AADAT_HUMAN / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Homo sapiens
AADAT / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial (EC 2.6.1.7; EC 2.6.1.39) from Homo sapiens
Q8N5Z0: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Homo sapiens

26% id,
81% cov

Pf6N2E2_5300: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

AADAT_HUMAN / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Homo sapiens
AADAT / Q8N5Z0: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial (EC 2.6.1.7; EC 2.6.1.39) from Homo sapiens
Q8N5Z0: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Homo sapiens

27% id,
83% cov

Aadat / Q64602: α-aminoadipate aminotransferase subunit (EC 2.6.1.39) from Rattus norvegicus

30% id,
60% cov

AADAT_MOUSE / Q9WVM8: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial; KAT/AadAT; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Glycine transaminase AADAT; Kynurenine aminotransferase II; Kynurenine--glyoxylate transaminase AADAT; Kynurenine--oxoglutarate aminotransferase II; Kynurenine--oxoglutarate transaminase 2; Kynurenine--oxoglutarate transaminase II; Methionine--glyoxylate transaminase AADAT; EC 2.6.1.39; EC 2.6.1.4; EC 2.6.1.63; EC 2.6.1.7; EC 2.6.1.73 from Mus musculus
Q9WVM8: 2-aminoadipate transaminase (EC 2.6.1.39); kynurenine-oxoglutarate transaminase (EC 2.6.1.7) from Mus musculus

30% id,
51% cov

More...

Pf6N2E2_4288: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

30% id,
74% cov

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

31% id,
68% cov

Pf6N2E2_5890: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
is similar to:
PaperBLAST

LYSN_THET2 / Q72LL6: 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT; EC 2.6.1.39 from Thermus thermophilus
Q72LL6: 2-aminoadipate transaminase (EC 2.6.1.39) from Thermus thermophilus

35% id,
57% cov

lysN / Q5SL82: L-2-aminoadipate aminotransferase monomer (EC 2.6.1.39) from Thermus thermophilus

35% id,
57% cov

ARO8_YEAST / P53090: Aromatic/aminoadipate aminotransferase 1; 2-aminoadipate aminotransferase; 2-aminoadipate transaminase; Alpha-aminoadipate aminotransferase; AadAT; Aromatic amino acid aminotransferase 1; Aromatic amino acid aminotransferase I; Aromatic amino acid-requiring protein 8; EC 2.6.1.39; EC 2.6.1.57 from Saccharomyces cerevisiae
ARO8 / P53090: aromatic amino acid/aminoadipate aminotransferase monomer (EC 2.6.1.39; EC 2.6.1.1; EC 2.6.1.28) from Saccharomyces cerevisiae
P53090: 2-aminoadipate transaminase (EC 2.6.1.39); aromatic-amino-acid transaminase (EC 2.6.1.57) from Saccharomyces cerevisiae

22% id,
31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 28 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3351213-3352541 (frame +3) on unitig_0|quiver.unitig_1|quiver|pilon
is similar to:
PaperBLAST

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti
SMc04386: 2-aminoadipate:2-oxoglutarate aminotransferase (EC 2.6.1.39) from Sinorhizobium meliloti
Also see hits to annotated proteins above

30% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory