Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 23 curated entries in PaperBLAST's database that match '2.6.1.9' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_3251: Histidinol-phosphate aminotransferase (EC 2.6.1.9)
is similar to:		 PaperBLAST

Pf6N2E2_3251: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas fluorescens

 100% id,
100% cov

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

 83% id,
100% cov

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

 81% id,
100% cov

More...

Pf6N2E2_2519: Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57)
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 43% id,
98% cov

PGA1_c25240: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Phaeobacter inhibens

 40% id,
98% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

 39% id,
97% cov

More...

Pf6N2E2_2862: Uncharacterized PLP-dependent aminotransferase YfdZ
is similar to:		 PaperBLAST

HP15_2427: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Marinobacter adhaerens

 28% id,
84% cov

PP_0967: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas putida

 27% id,
85% cov

Psest_3297: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Pseudomonas stutzeri

 28% id,
78% cov

More...

Pf6N2E2_2446: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:		 PaperBLAST

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

 25% id,
94% cov

Pf6N2E2_5741: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
is similar to:		 PaperBLAST

HIS8_ECOLI / P06986: Histidinol-phosphate aminotransferase; Imidazole acetol-phosphate transaminase; HPAT; HspAT; EC 2.6.1.9 from Escherichia coli
HisC / b2021: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli
hisC / P06986: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Escherichia coli

 30% id,
72% cov

DvMF_0908: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

 27% id,
77% cov

DVU1029: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Desulfovibrio vulgaris

 28% id,
72% cov

More...

Pf6N2E2_462: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:		 PaperBLAST

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

 25% id,
88% cov

Pf6N2E2_5161: Valine--pyruvate aminotransferase (EC 2.6.1.66) ## AvtA
is similar to:		 PaperBLAST

BT0202: histidinol-phosphate aminotransferase (EC 2.6.1.9) from Bacteroides thetaiotaomicron

 24% id,
67% cov

Pf6N2E2_3173: Aspartate aminotransferase (EC 2.6.1.1)
is similar to:		 PaperBLAST

HIS8_ZYMMO / P34037: Histidinol-phosphate aminotransferase; Imidazole acetol phosphate aminotransferase; IAP aminotransferase; Imidazole acetol-phosphate transaminase; EC 2.6.1.9 from Zymomonas mobilis

 28% id,
56% cov

AZOBR_RS20485: histidinol-phosphate aminotransferase [EC:2.6.1.9] from Azospirillum brasilense

 26% id,
59% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory