Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.144' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_3338: 1-phosphofructokinase (EC 2.7.1.56)
is similar to:
PaperBLAST

PfkB / b1723: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli
pfkB / P06999: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

31% id,
96% cov

lacC / P0A0B8: D-tagatose-6-phosphate kinase subunit (EC 2.7.1.144) from Staphylococcus aureus
P0A0B9: tagatose-6-phosphate kinase (EC 2.7.1.144) from Staphylococcus aureus

31% id,
94% cov

LACC_LACLL / P23391: Tagatose-6-phosphate kinase; Phosphotagatokinase; EC 2.7.1.144 from Lactococcus lactis

31% id,
91% cov

More...

Pf6N2E2_165: Ribokinase (EC 2.7.1.15)
is similar to:
PaperBLAST

PfkB / b1723: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli
pfkB / P06999: 6-phosphofructokinase 2 (EC 2.7.1.11; EC 2.7.1.144) from Escherichia coli

24% id,
91% cov

LACC_LACLL / P23391: Tagatose-6-phosphate kinase; Phosphotagatokinase; EC 2.7.1.144 from Lactococcus lactis

23% id,
83% cov

lacC / P0A0B8: D-tagatose-6-phosphate kinase subunit (EC 2.7.1.144) from Staphylococcus aureus
P0A0B9: tagatose-6-phosphate kinase (EC 2.7.1.144) from Staphylococcus aureus

21% id,
84% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory