Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 46 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4)
is similar to:
PaperBLAST

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

100% id,
100% cov

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

100% id,
100% cov

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

49% id,
98% cov

More...

Pf6N2E2_804: Fructokinase (EC 2.7.1.4)
is similar to:
PaperBLAST

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

83% id,
99% cov

PfGW456L13_3036: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

80% id,
99% cov

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

37% id,
99% cov

More...

Pf6N2E2_629: 2-ketogluconate kinase (EC 2.7.1.13)
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

30% id,
98% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

30% id,
98% cov

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

30% id,
96% cov

More...

Pf6N2E2_165: Ribokinase (EC 2.7.1.15)
is similar to:
PaperBLAST

N515DRAFT_1919: Fructokinase (EC 2.7.1.4) from Dyella japonica

29% id,
98% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

28% id,
100% cov

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

28% id,
99% cov

More...

Pf6N2E2_512: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain
is similar to:
PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

23% id,
94% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

34% id,
36% cov

Pf6N2E2_3394: Ribokinase (EC 2.7.1.15)
is similar to:
PaperBLAST

Echvi_2804: Fructokinase (EC 2.7.1.4) from Echinicola vietnamensis

30% id,
42% cov

Pf6N2E2_3338: 1-phosphofructokinase (EC 2.7.1.56)
is similar to:
PaperBLAST

Shewana3_0069: Fructokinase (EC 2.7.1.4) from Shewanella sp.

29% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory