Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 11 curated entries in PaperBLAST's database that match '2.7.1.56' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_3338: 1-phosphofructokinase (EC 2.7.1.56)
is similar to:
PaperBLAST

AO356_07330: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas fluorescens

97% id,
100% cov

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

66% id,
100% cov

K1PF_VIBCH / Q9KM71: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Vibrio cholerae

48% id,
97% cov

More...

Pf6N2E2_165: Ribokinase (EC 2.7.1.15)
is similar to:
PaperBLAST

AO356_07330: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas fluorescens

28% id,
92% cov

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii
D4GYE6: 1-phosphofructokinase (EC 2.7.1.56) from Haloferax volcanii

31% id,
83% cov

K1PF_ECOLI / P0AEW9: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Escherichia coli
Fpk / b2168: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli
fruK / P0AEW9: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli

25% id,
100% cov

More...

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4)
is similar to:
PaperBLAST

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

27% id,
88% cov

Pf6N2E2_512: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain
is similar to:
PaperBLAST

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii
D4GYE6: 1-phosphofructokinase (EC 2.7.1.56) from Haloferax volcanii

27% id,
83% cov

Pf6N2E2_629: 2-ketogluconate kinase (EC 2.7.1.13)
is similar to:
PaperBLAST

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

34% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory