Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 5 curated entries in PaperBLAST's database that match '3.1.1.24' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_2830: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

87% id,
98% cov

pcaD / Q88N36: subunit of 3-oxoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas putida
Q88N36: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Pseudomonas putida

71% id,
99% cov

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

48% id,
96% cov

More...

Pf6N2E2_2401: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)
is similar to:
PaperBLAST

pcaD / Q88N36: subunit of 3-oxoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas putida
Q88N36: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Pseudomonas putida

31% id,
98% cov

Q13KT2: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Paraburkholderia xenovorans

28% id,
100% cov

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

34% id,
59% cov

Pf6N2E2_2683: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

27% id,
96% cov

Pf6N2E2_376: Similar to non-heme chloroperoxidase, sll5080 homolog
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

26% id,
91% cov

Pf6N2E2_253: Non-heme chloroperoxidase (EC 1.11.1.10)
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

28% id,
80% cov

Pf6N2E2_1251: Similar to non-heme chloroperoxidase, sll5080 homolog
is similar to:
PaperBLAST

AO353_17230: Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas fluorescens

26% id,
84% cov

Pf6N2E2_138: Alpha/beta hydrolase fold (EC 3.8.1.5)
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

29% id,
65% cov

Pf6N2E2_667: Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex (EC 2.3.1.-)
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

31% id,
61% cov

Pf6N2E2_5473: hydrolase, alpha/beta fold family
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

29% id,
63% cov

pcaD / Q88N36: subunit of 3-oxoadipate enol-lactone hydrolase (EC 3.1.1.24) from Pseudomonas putida
Q88N36: 3-oxoadipate enol-lactonase (EC 3.1.1.24) from Pseudomonas putida

34% id,
46% cov

Pf6N2E2_3773: Poly(3-hydroxyalkanoate) depolymerase
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

28% id,
61% cov

Pf6N2E2_2829: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

45% id,
31% cov

Pf6N2E2_3420: Proline iminopeptidase (EC 3.4.11.5)
is similar to:
PaperBLAST

Q0SH24: 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii

27% id,
35% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory