Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)
Found 4 curated entries in PaperBLAST's database that match '3.1.1.68' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query
Pf6N2E2_488: Gluconolactonase (EC 3.1.1.17) is similar to: | PaperBLAST |
XACC_HALVD / D4GP31: Pentonolactonase XacC; L-arabinonolactonase; Xylono-1,4-lactonase; EC 3.1.1.15; EC 3.1.1.68 from Haloferax volcanii | 32% id, 97% cov |
Ga0059261_1893: Xylonolactonase (EC 3.1.1.68) from Sphingomonas koreensis | 33% id, 91% cov |
Pf6N2E2_5966: L-arabinolactonase (EC 3.1.1.15) is similar to: | PaperBLAST |
Ga0059261_1893: Xylonolactonase (EC 3.1.1.68) from Sphingomonas koreensis | 32% id, 94% cov |
XACC_HALVD / D4GP31: Pentonolactonase XacC; L-arabinonolactonase; Xylono-1,4-lactonase; EC 3.1.1.15; EC 3.1.1.68 from Haloferax volcanii | 31% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
554455-555399 (frame -1) on unitig_0|quiver.unitig_1|quiver|pilon is similar to: | PaperBLAST |
Ga0059261_1893: Xylonolactonase (EC 3.1.1.68) from Sphingomonas koreensis | 33% id, 97% cov |
Lawrence Berkeley National Laboratory