Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 31 curated entries in PaperBLAST's database that match '3.1.2.6' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_3043: S-formylglutathione hydrolase (EC 3.1.2.12)
is similar to:
PaperBLAST

YeiG / b2154: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli
yeiG / P33018: S-formylglutathione hydrolase / S-lactoylglutathione hydrolase (EC 3.1.2.12; EC 3.1.2.6) from Escherichia coli

61% id,
99% cov

Pf6N2E2_587: Hydroxyacylglutathione hydrolase (EC 3.1.2.6)
is similar to:
PaperBLAST

GLO2_ECOLI / P0AC84: Hydroxyacylglutathione hydrolase GloB; Glyoxalase II; Glx II; EC 3.1.2.6 from Escherichia coli
YafR / b0212: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli
gloB / MB|P0AC84: hydroxyacylglutathione hydrolase; EC 3.1.2.6 from Escherichia coli
gloB / P0AC84: hydroxyacylglutathione hydrolase GloB (EC 3.1.2.6) from Escherichia coli

48% id,
100% cov

GLO2_SALTY / Q8ZRM2: Hydroxyacylglutathione hydrolase; Glyoxalase II; Glx II; EC 3.1.2.6 from Salmonella typhimurium
Q8ZRM2: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Salmonella enterica

46% id,
100% cov

Q8YZ99: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Nostoc sp.

46% id,
100% cov

More...

Pf6N2E2_1531: FIG146518: Zn-dependent hydrolases, including glyoxylases
is similar to:
PaperBLAST

GLO22_SCHPO / O94250: Probable hydroxyacylglutathione hydrolase C13B11.03c; Glyoxalase II; Glx II; EC 3.1.2.6 from Schizosaccharomyces pombe

31% id,
75% cov

GLO21_SCHPO / Q9UT36: Probable hydroxyacylglutathione hydrolase C824.07; Glyoxalase II; Glx II; EC 3.1.2.6 from Schizosaccharomyces pombe

30% id,
69% cov

A0A0D1GCF8: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Staphylococcus aureus

38% id,
38% cov

Pf6N2E2_2745: Metal-dependent hydrolases of the beta-lactamase superfamily I
is similar to:
PaperBLAST

A0A0D1GCF8: hydroxyacylglutathione hydrolase (EC 3.1.2.6) from Staphylococcus aureus

27% id,
85% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory