Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 6 curated entries in PaperBLAST's database that match '3.3.2.12' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 18 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_1834: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

35% id,
100% cov

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

35% id,
100% cov

Pf6N2E2_1934: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

33% id,
94% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

33% id,
94% cov

Pf6N2E2_1147: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

33% id,
94% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

33% id,
94% cov

Pf6N2E2_1840: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

31% id,
95% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

31% id,
95% cov

Pf6N2E2_5493: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

29% id,
98% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

29% id,
98% cov

Pf6N2E2_742: 4-hydroxycinnamoyl CoA hydratase/lyase (Enoyl-CoA hydratase/lyase) (EC 4.2.1.17)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

30% id,
94% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

29% id,
94% cov

Pf6N2E2_1149: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

28% id,
92% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

28% id,
92% cov

Pf6N2E2_1850: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

33% id,
72% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

33% id,
72% cov

Pf6N2E2_6000: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

34% id,
68% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

34% id,
68% cov

Pf6N2E2_1269: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

24% id,
93% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

24% id,
93% cov

Pf6N2E2_1835: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

paaZ1 / A0A2Z5MCI7: oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia caledonica

28% id,
76% cov

H281DRAFT_04594: putative oxepin-CoA hydrolase (EC 3.3.2.12) from Paraburkholderia bryophila

27% id,
76% cov

Pf6N2E2_3685: Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

25% id,
73% cov

Pf6N2E2_225: Putative benzaldehyde dehydrogenase oxidoreductase protein (EC 1.2.1.28)
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

25% id,
72% cov

Pf6N2E2_3582: L-pipecolate dehydrogenase (EC 1.5.99.3)
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

25% id,
72% cov

Pf6N2E2_515: Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

25% id,
59% cov

Pf6N2E2_1067: Glyceraldehyde-3-phosphate dehydrogenase, putative
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

23% id,
62% cov

Pf6N2E2_2876: enoyl-CoA hydratase, R-specific
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

37% id,
20% cov

Pf6N2E2_4987: MaoC-like domain protein
is similar to:
PaperBLAST

PAAZ_ECOLI / P77455: Bifunctional protein PaaZ; EC 3.3.2.12; EC 1.2.1.91 from Escherichia coli
YdbN / b1387: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
paaZ / P77455: fused 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase and oxepin-CoA hydrolase (EC 3.3.2.12; EC 1.2.1.91; EC 4.2.1.55) from Escherichia coli
P77455: oxepin-CoA hydrolase (EC 3.3.2.12) from Escherichia coli

34% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory