Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 46 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_4087: L-asparaginase (EC 3.5.1.1)
is similar to:
PaperBLAST

Pf6N2E2_4087: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

100% id,
100% cov

AO356_11100: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

97% id,
100% cov

Pf1N1B4_2023: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

92% id,
100% cov

More...

Pf6N2E2_5828: FOG: Ankyrin repeat
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

30% id,
26% cov

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

23% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory