Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 37 curated entries in PaperBLAST's database that match '3.5.99.6'.

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_4217: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
is similar to:
PaperBLAST

Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis

31% id,
99% cov

SO3506: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella oneidensis

31% id,
99% cov

Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp.

30% id,
99% cov

More...

Pf6N2E2_2884: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
is similar to:
PaperBLAST

GPI1 / O97439: glucosamine 6-phosphate isomerase 1 (EC 3.5.99.6) from Giardia intestinalis

26% id,
76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory