Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas fluorescens FW300-N2E2 (pseudo6_N2E2)

Found 49 curated entries in PaperBLAST's database that match '3.7.1.2'.

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Pseudomonas fluorescens FW300-N2E2, or try another query

Pf6N2E2_517: Epi-inositol hydrolase (EC 3.7.1.-)
is similar to:
PaperBLAST

AO356_23185: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas fluorescens

98% id,
100% cov

Pf1N1B4_4279: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas fluorescens

91% id,
100% cov

AO353_21360: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Pseudomonas fluorescens

91% id,
100% cov

More...

Pf6N2E2_1672: hypothetical protein
is similar to:
PaperBLAST

PHLG_PSEFL / A0A2K9M484: 2,4-diacetylphloroglucinol hydrolase; DAPG hydrolase; EC 3.7.1.24 from Pseudomonas fluorescens

95% id,
100% cov

PHLG_PSEF5 / Q4K423: 2,4-diacetylphloroglucinol hydrolase; DAPG hydrolase; EC 3.7.1.24 from Pseudomonas fluorescens

78% id,
99% cov

PHLG_PSESP / F7J5X9: 2,4-diacetylphloroglucinol hydrolase; DAPG hydrolase; EC 3.7.1.24 from Pseudomonas sp.

78% id,
99% cov

More...

Pf6N2E2_1662: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase.
is similar to:
PaperBLAST

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

72% id,
100% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

54% id,
95% cov

naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp.

36% id,
89% cov

More...

Pf6N2E2_865: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

60% id,
99% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

51% id,
96% cov

HBZF_PSEAC / Q0QFQ3: Maleylpyruvate hydrolase; MPH11; EC 3.7.1.23 from Pseudomonas alcaligenes
hbzF / Q0QFQ3: maleylpyruvate hydrolase monomer (EC 3.7.1.23) from Pseudomonas alcaligenes
Q0QFQ3: maleylpyruvate hydrolase (EC 3.7.1.23) from Pseudomonas alcaligenes

34% id,
86% cov

More...

Pf6N2E2_386: similar to ribulose-1,5-bisphosphate carboxylase, Type III
is similar to:
PaperBLAST

oiaT / A7IJG7: 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase (EC 3.7.1.28) from Xanthobacter autotrophicus

53% id,
99% cov

Pf6N2E2_5291: Fumarylacetoacetase (EC 3.7.1.2)
is similar to:
PaperBLAST

FAAA_HUMAN / P16930: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Homo sapiens
FAH / P16930: Fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens

49% id,
97% cov

FAAA_MOUSE / P35505: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Mus musculus
P35505: fumarylacetoacetase (EC 3.7.1.2) from Mus musculus

49% id,
97% cov

FAAA_RAT / P25093: Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Rattus norvegicus

48% id,
97% cov

More...

Pf6N2E2_6018: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp.

45% id,
96% cov

NAGK_RALSP / O86042: Fumarylpyruvate hydrolase; Naphthalene degradation protein K; EC 3.7.1.20 from Ralstonia sp.
nagK / O86042: fumarylpyruvate hydrolase (EC 3.7.1.20) from Ralstonia sp.

40% id,
92% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

32% id,
74% cov

More...

Pf6N2E2_229: Putative fumarylacetoacetate (FAA) hydrolase
is similar to:
PaperBLAST

HBZF_PSEAC / Q0QFQ3: Maleylpyruvate hydrolase; MPH11; EC 3.7.1.23 from Pseudomonas alcaligenes
hbzF / Q0QFQ3: maleylpyruvate hydrolase monomer (EC 3.7.1.23) from Pseudomonas alcaligenes
Q0QFQ3: maleylpyruvate hydrolase (EC 3.7.1.23) from Pseudomonas alcaligenes

36% id,
99% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

37% id,
96% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

33% id,
100% cov

More...

Pf6N2E2_1308: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
is similar to:
PaperBLAST

NAGK_RALSP / O86042: Fumarylpyruvate hydrolase; Naphthalene degradation protein K; EC 3.7.1.20 from Ralstonia sp.
nagK / O86042: fumarylpyruvate hydrolase (EC 3.7.1.20) from Ralstonia sp.

32% id,
98% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

35% id,
87% cov

naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp.

34% id,
88% cov

More...

Pf6N2E2_3934: Fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp.

35% id,
86% cov

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) from Herbaspirillum seropedicae

33% id,
74% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

32% id,
74% cov

More...

Pf6N2E2_1307: 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
is similar to:
PaperBLAST

NAGK_RALSP / O86042: Fumarylpyruvate hydrolase; Naphthalene degradation protein K; EC 3.7.1.20 from Ralstonia sp.
nagK / O86042: fumarylpyruvate hydrolase (EC 3.7.1.20) from Ralstonia sp.

29% id,
94% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC 3.7.1.26) from Sphingomonas sp.

36% id,
71% cov

naaD / F8QQ75: 3-fumarylpyruvate hydrolase (EC 3.7.1.20) from Bradyrhizobium sp.

28% id,
87% cov

More...

Pf6N2E2_667: Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex (EC 2.3.1.-)
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

29% id,
89% cov

Pf6N2E2_3773: Poly(3-hydroxyalkanoate) depolymerase
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

27% id,
90% cov

Pf6N2E2_253: Non-heme chloroperoxidase (EC 1.11.1.10)
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

27% id,
89% cov

Pf6N2E2_138: Alpha/beta hydrolase fold (EC 3.8.1.5)
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

26% id,
89% cov

Pf6N2E2_5175: Acetolactate synthase large subunit (EC 2.2.1.6)
is similar to:
PaperBLAST

HSERO_RS12130: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Herbaspirillum seropedicae

24% id,
92% cov

PGA1_c07250: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Phaeobacter inhibens

25% id,
87% cov

IOLD_BACSU / P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; THcHDO hydrolase; EC 3.7.1.22 from Bacillus subtilis
iolD / P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC 3.7.1.22) from Bacillus subtilis
P42415: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Bacillus subtilis

22% id,
94% cov

More...

Pf6N2E2_5839: Glyoxylate carboligase (EC 4.1.1.47)
is similar to:
PaperBLAST

SMc01166: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Sinorhizobium meliloti

25% id,
82% cov

Q9L3I0: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Rhizobium leguminosarum

25% id,
80% cov

PGA1_c07250: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) from Phaeobacter inhibens

26% id,
76% cov

More...

Pf6N2E2_2290: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
is similar to:
PaperBLAST

BAMA_THAAR / O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; Beta-oxoacyl-CoA hydrolase; Oah; EC 3.7.1.21 from Thauera aromatica
O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase (EC 3.7.1.21) from Thauera aromatica

25% id,
66% cov

BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens

25% id,
52% cov

Pf6N2E2_1147: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
is similar to:
PaperBLAST

BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens

34% id,
45% cov

Pf6N2E2_3422: Proline iminopeptidase (EC 3.4.11.5)
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida

28% id,
53% cov

Pf6N2E2_1935: Enoyl-CoA hydratase (EC 4.2.1.17)
is similar to:
PaperBLAST

BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens

27% id,
41% cov

Pf6N2E2_1149: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
is similar to:
PaperBLAST

BAMA_THAAR / O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; Beta-oxoacyl-CoA hydrolase; Oah; EC 3.7.1.21 from Thauera aromatica
O87872: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase (EC 3.7.1.21) from Thauera aromatica

23% id,
37% cov

BAMA_GEOMG / Q39TV7: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; 6-OCH-CoA hydrolase; 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase; EC 3.7.1.21 from Geobacter metallireducens

23% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 22 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

317246-318094 (frame +2) on unitig_0|quiver.unitig_1|quiver|pilon
is similar to:
PaperBLAST

TODF_PSEP1 / P23133: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida
todF / P23133: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida
Also see hits to annotated proteins above

27% id,
92% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory